Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CHD5Q8TDI0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.56■□□□□ 0.72
CHD5Q8TDI0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHD5Q8TDI0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CHD5Q8TDI0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHD5Q8TDI0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.56■□□□□ 0.72
CHD5Q8TDI0 AC087499.1-201ENST00000418141 1075 ntBASIC19.56■□□□□ 0.72
CHD5Q8TDI0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CHD5Q8TDI0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.56■□□□□ 0.72
CHD5Q8TDI0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.56■□□□□ 0.72
CHD5Q8TDI0 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHD5Q8TDI0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.56■□□□□ 0.72
CHD5Q8TDI0 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.56■□□□□ 0.72
CHD5Q8TDI0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.56■□□□□ 0.72
CHD5Q8TDI0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.56■□□□□ 0.72
CHD5Q8TDI0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.56■□□□□ 0.72
CHD5Q8TDI0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHD5Q8TDI0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHD5Q8TDI0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.55■□□□□ 0.72
CHD5Q8TDI0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHD5Q8TDI0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHD5Q8TDI0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.55■□□□□ 0.72
CHD5Q8TDI0 FITM1-202ENST00000559294 800 ntBASIC19.55■□□□□ 0.72
CHD5Q8TDI0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.55■□□□□ 0.72
CHD5Q8TDI0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHD5Q8TDI0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHD5Q8TDI0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHD5Q8TDI0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.55■□□□□ 0.72
CHD5Q8TDI0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.55■□□□□ 0.72
CHD5Q8TDI0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.55■□□□□ 0.72
CHD5Q8TDI0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
CHD5Q8TDI0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHD5Q8TDI0 TSPY21P-201ENST00000433481 731 ntBASIC19.55■□□□□ 0.72
CHD5Q8TDI0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CHD5Q8TDI0 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.55■□□□□ 0.72
CHD5Q8TDI0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHD5Q8TDI0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CHD5Q8TDI0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHD5Q8TDI0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHD5Q8TDI0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.54■□□□□ 0.72
CHD5Q8TDI0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHD5Q8TDI0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.54■□□□□ 0.72
CHD5Q8TDI0 AL032819.2-201ENST00000624543 2162 ntBASIC19.54■□□□□ 0.72
CHD5Q8TDI0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHD5Q8TDI0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CHD5Q8TDI0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHD5Q8TDI0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHD5Q8TDI0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHD5Q8TDI0 MFAP1P1-201ENST00000442257 1255 ntBASIC19.54■□□□□ 0.72
CHD5Q8TDI0 CA15P1-201ENST00000481698 905 ntBASIC19.54■□□□□ 0.72
CHD5Q8TDI0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.54■□□□□ 0.72
CHD5Q8TDI0 AP005242.2-201ENST00000580065 1175 ntBASIC19.54■□□□□ 0.72
CHD5Q8TDI0 AP000525.1-201ENST00000608286 694 ntBASIC19.54■□□□□ 0.72
CHD5Q8TDI0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHD5Q8TDI0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHD5Q8TDI0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHD5Q8TDI0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHD5Q8TDI0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHD5Q8TDI0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.54■□□□□ 0.72
CHD5Q8TDI0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHD5Q8TDI0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CHD5Q8TDI0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHD5Q8TDI0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHD5Q8TDI0 CYP2D8P-201ENST00000433633 1490 ntBASIC19.54■□□□□ 0.72
CHD5Q8TDI0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHD5Q8TDI0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD5Q8TDI0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CHD5Q8TDI0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CHD5Q8TDI0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CHD5Q8TDI0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHD5Q8TDI0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.53■□□□□ 0.72
CHD5Q8TDI0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.53■□□□□ 0.72
CHD5Q8TDI0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHD5Q8TDI0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.53■□□□□ 0.72
CHD5Q8TDI0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD5Q8TDI0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.53■□□□□ 0.72
CHD5Q8TDI0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.53■□□□□ 0.72
CHD5Q8TDI0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHD5Q8TDI0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
CHD5Q8TDI0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHD5Q8TDI0 AC008040.2-201ENST00000461049 708 ntBASIC19.53■□□□□ 0.72
CHD5Q8TDI0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CHD5Q8TDI0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.53■□□□□ 0.72
CHD5Q8TDI0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD5Q8TDI0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD5Q8TDI0 AC005332.7-201ENST00000614046 2005 ntBASIC19.53■□□□□ 0.72
CHD5Q8TDI0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHD5Q8TDI0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.53■□□□□ 0.72
CHD5Q8TDI0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD5Q8TDI0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD5Q8TDI0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.52■□□□□ 0.72
CHD5Q8TDI0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD5Q8TDI0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.52■□□□□ 0.72
CHD5Q8TDI0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.52■□□□□ 0.72
CHD5Q8TDI0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.52■□□□□ 0.72
CHD5Q8TDI0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD5Q8TDI0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD5Q8TDI0 AC141586.3-201ENST00000562166 1838 ntBASIC19.52■□□□□ 0.72
CHD5Q8TDI0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD5Q8TDI0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms