Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.22■□□□□ 0.51
SNIP1Q8TAD8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.22■□□□□ 0.51
SNIP1Q8TAD8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.22■□□□□ 0.51
SNIP1Q8TAD8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
SNIP1Q8TAD8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNIP1Q8TAD8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.22■□□□□ 0.51
SNIP1Q8TAD8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SNIP1Q8TAD8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.22■□□□□ 0.51
SNIP1Q8TAD8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.22■□□□□ 0.51
SNIP1Q8TAD8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNIP1Q8TAD8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNIP1Q8TAD8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNIP1Q8TAD8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNIP1Q8TAD8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNIP1Q8TAD8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNIP1Q8TAD8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNIP1Q8TAD8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNIP1Q8TAD8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SNIP1Q8TAD8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNIP1Q8TAD8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNIP1Q8TAD8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SNIP1Q8TAD8 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNIP1Q8TAD8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.21■□□□□ 0.51
SNIP1Q8TAD8 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNIP1Q8TAD8 AP000347.1-202ENST00000435868 847 ntBASIC18.21■□□□□ 0.51
SNIP1Q8TAD8 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.21■□□□□ 0.51
SNIP1Q8TAD8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.21■□□□□ 0.51
SNIP1Q8TAD8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.21■□□□□ 0.51
SNIP1Q8TAD8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SNIP1Q8TAD8 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNIP1Q8TAD8 AC092119.3-201ENST00000612618 583 ntBASIC18.21■□□□□ 0.51
SNIP1Q8TAD8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.21■□□□□ 0.51
SNIP1Q8TAD8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNIP1Q8TAD8 KRT8P10-201ENST00000450021 1447 ntBASIC18.21■□□□□ 0.51
SNIP1Q8TAD8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNIP1Q8TAD8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.21■□□□□ 0.51
SNIP1Q8TAD8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
SNIP1Q8TAD8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SNIP1Q8TAD8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SNIP1Q8TAD8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SNIP1Q8TAD8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNIP1Q8TAD8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNIP1Q8TAD8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SNIP1Q8TAD8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNIP1Q8TAD8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNIP1Q8TAD8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNIP1Q8TAD8 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNIP1Q8TAD8 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.2■□□□□ 0.5
SNIP1Q8TAD8 CKBP1-201ENST00000565489 1086 ntBASIC18.2■□□□□ 0.5
SNIP1Q8TAD8 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.2■□□□□ 0.5
SNIP1Q8TAD8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNIP1Q8TAD8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNIP1Q8TAD8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNIP1Q8TAD8 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.2■□□□□ 0.5
SNIP1Q8TAD8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SNIP1Q8TAD8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNIP1Q8TAD8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SNIP1Q8TAD8 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.19■□□□□ 0.5
SNIP1Q8TAD8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.19■□□□□ 0.5
SNIP1Q8TAD8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.19■□□□□ 0.5
SNIP1Q8TAD8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNIP1Q8TAD8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNIP1Q8TAD8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNIP1Q8TAD8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.19■□□□□ 0.5
SNIP1Q8TAD8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNIP1Q8TAD8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.19■□□□□ 0.5
SNIP1Q8TAD8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SNIP1Q8TAD8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.19■□□□□ 0.5
SNIP1Q8TAD8 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.19■□□□□ 0.5
SNIP1Q8TAD8 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SNIP1Q8TAD8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.19■□□□□ 0.5
SNIP1Q8TAD8 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNIP1Q8TAD8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.19■□□□□ 0.5
SNIP1Q8TAD8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNIP1Q8TAD8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.19■□□□□ 0.5
SNIP1Q8TAD8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SNIP1Q8TAD8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
SNIP1Q8TAD8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SNIP1Q8TAD8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNIP1Q8TAD8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.19■□□□□ 0.5
SNIP1Q8TAD8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SNIP1Q8TAD8 DPP3P2-201ENST00000416030 1696 ntBASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 AC005229.4-201ENST00000610085 2198 ntBASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 AL845331.1-201ENST00000424978 1190 ntBASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms