Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFWD2Q8NHY2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFWD2Q8NHY2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.08■□□□□ 0.64
RFWD2Q8NHY2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFWD2Q8NHY2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFWD2Q8NHY2 NOC2LP2-201ENST00000407594 1944 ntBASIC19.08■□□□□ 0.64
RFWD2Q8NHY2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
RFWD2Q8NHY2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFWD2Q8NHY2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 AC068880.1-201ENST00000507289 2297 ntBASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 AP000997.3-201ENST00000623333 2250 ntBASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 Z98044.1-201ENST00000632503 1764 ntBASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD2Q8NHY2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 AL591742.1-201ENST00000604433 565 ntBASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD2Q8NHY2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFWD2Q8NHY2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.05■□□□□ 0.64
RFWD2Q8NHY2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RFWD2Q8NHY2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RFWD2Q8NHY2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFWD2Q8NHY2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
RFWD2Q8NHY2 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFWD2Q8NHY2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFWD2Q8NHY2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.05■□□□□ 0.64
RFWD2Q8NHY2 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.05■□□□□ 0.64
RFWD2Q8NHY2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFWD2Q8NHY2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFWD2Q8NHY2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.05■□□□□ 0.64
RFWD2Q8NHY2 HLA-G-202ENST00000376815 851 ntBASIC19.05■□□□□ 0.64
RFWD2Q8NHY2 HLA-G-203ENST00000376818 1127 ntBASIC19.05■□□□□ 0.64
RFWD2Q8NHY2 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.05■□□□□ 0.64
RFWD2Q8NHY2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.05■□□□□ 0.64
RFWD2Q8NHY2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.05■□□□□ 0.64
RFWD2Q8NHY2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
RFWD2Q8NHY2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.05■□□□□ 0.64
RFWD2Q8NHY2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
RFWD2Q8NHY2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.05■□□□□ 0.64
RFWD2Q8NHY2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFWD2Q8NHY2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.05■□□□□ 0.64
RFWD2Q8NHY2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RFWD2Q8NHY2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms