Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 AC093484.2-201ENST00000580996 2166 ntBASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 TMEM179-206ENST00000616017 1645 ntBASIC19.51■□□□□ 0.71
CFAP61Q8NHU2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.5■□□□□ 0.71
CFAP61Q8NHU2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP61Q8NHU2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP61Q8NHU2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.5■□□□□ 0.71
CFAP61Q8NHU2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP61Q8NHU2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.5■□□□□ 0.71
CFAP61Q8NHU2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP61Q8NHU2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
CFAP61Q8NHU2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP61Q8NHU2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP61Q8NHU2 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.5■□□□□ 0.71
CFAP61Q8NHU2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.5■□□□□ 0.71
CFAP61Q8NHU2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP61Q8NHU2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CFAP61Q8NHU2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP61Q8NHU2 AL691432.2-201ENST00000607222 2038 ntBASIC19.5■□□□□ 0.71
CFAP61Q8NHU2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.5■□□□□ 0.71
CFAP61Q8NHU2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP61Q8NHU2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP61Q8NHU2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CFAP61Q8NHU2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP61Q8NHU2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP61Q8NHU2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 SOX15-203ENST00000570788 1093 ntBASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP61Q8NHU2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.48■□□□□ 0.71
CFAP61Q8NHU2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP61Q8NHU2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP61Q8NHU2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP61Q8NHU2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.48■□□□□ 0.71
CFAP61Q8NHU2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP61Q8NHU2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.48■□□□□ 0.71
CFAP61Q8NHU2 CD99P1-205ENST00000527459 561 ntBASIC19.48■□□□□ 0.71
CFAP61Q8NHU2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.48■□□□□ 0.71
CFAP61Q8NHU2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.48■□□□□ 0.71
CFAP61Q8NHU2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.48■□□□□ 0.71
CFAP61Q8NHU2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CFAP61Q8NHU2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP61Q8NHU2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP61Q8NHU2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP61Q8NHU2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.48■□□□□ 0.71
CFAP61Q8NHU2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP61Q8NHU2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP61Q8NHU2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms