Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC30.26■■■□□ 2.43
VPS8Q8N3P4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC30.26■■■□□ 2.43
VPS8Q8N3P4 LINC01568-207ENST00000641790 1380 ntBASIC30.26■■■□□ 2.43
VPS8Q8N3P4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
VPS8Q8N3P4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC30.26■■■□□ 2.43
VPS8Q8N3P4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC30.26■■■□□ 2.43
VPS8Q8N3P4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
VPS8Q8N3P4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
VPS8Q8N3P4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
VPS8Q8N3P4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC30.25■■■□□ 2.43
VPS8Q8N3P4 AC113347.1-201ENST00000413321 391 ntBASIC30.25■■■□□ 2.43
VPS8Q8N3P4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC30.25■■■□□ 2.43
VPS8Q8N3P4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC30.25■■■□□ 2.43
VPS8Q8N3P4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
VPS8Q8N3P4 EGLN1P1-201ENST00000531623 762 ntBASIC30.25■■■□□ 2.43
VPS8Q8N3P4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
VPS8Q8N3P4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC30.25■■■□□ 2.43
VPS8Q8N3P4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC30.25■■■□□ 2.43
VPS8Q8N3P4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC30.25■■■□□ 2.43
VPS8Q8N3P4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC30.25■■■□□ 2.43
VPS8Q8N3P4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
VPS8Q8N3P4 GAS2L1P1-201ENST00000420145 1480 ntBASIC30.25■■■□□ 2.43
VPS8Q8N3P4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
VPS8Q8N3P4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
VPS8Q8N3P4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC30.25■■■□□ 2.43
VPS8Q8N3P4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
VPS8Q8N3P4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC30.25■■■□□ 2.43
VPS8Q8N3P4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC30.25■■■□□ 2.43
VPS8Q8N3P4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
VPS8Q8N3P4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
VPS8Q8N3P4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
VPS8Q8N3P4 CA15P1-201ENST00000481698 905 ntBASIC30.24■■■□□ 2.43
VPS8Q8N3P4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC30.24■■■□□ 2.43
VPS8Q8N3P4 AL023803.3-201ENST00000615559 522 ntBASIC30.24■■■□□ 2.43
VPS8Q8N3P4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC30.24■■■□□ 2.43
VPS8Q8N3P4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
VPS8Q8N3P4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
VPS8Q8N3P4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC30.24■■■□□ 2.43
VPS8Q8N3P4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
VPS8Q8N3P4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC30.23■■■□□ 2.43
VPS8Q8N3P4 SLC25A3P1-201ENST00000443844 931 ntBASIC30.23■■■□□ 2.43
VPS8Q8N3P4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC30.23■■■□□ 2.43
VPS8Q8N3P4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC30.23■■■□□ 2.43
VPS8Q8N3P4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC30.23■■■□□ 2.43
VPS8Q8N3P4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC30.23■■■□□ 2.43
VPS8Q8N3P4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
VPS8Q8N3P4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
VPS8Q8N3P4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
VPS8Q8N3P4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
VPS8Q8N3P4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC30.22■■■□□ 2.43
VPS8Q8N3P4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC30.22■■■□□ 2.43
VPS8Q8N3P4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
VPS8Q8N3P4 AC092338.2-201ENST00000568827 1415 ntBASIC30.22■■■□□ 2.43
VPS8Q8N3P4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC30.22■■■□□ 2.43
VPS8Q8N3P4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC30.22■■■□□ 2.43
VPS8Q8N3P4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
VPS8Q8N3P4 SLC25A1P2-201ENST00000430693 912 ntBASIC30.22■■■□□ 2.43
VPS8Q8N3P4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
VPS8Q8N3P4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC30.22■■■□□ 2.43
VPS8Q8N3P4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
VPS8Q8N3P4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
VPS8Q8N3P4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
VPS8Q8N3P4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC30.21■■■□□ 2.43
VPS8Q8N3P4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
VPS8Q8N3P4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC30.21■■■□□ 2.43
VPS8Q8N3P4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
VPS8Q8N3P4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
VPS8Q8N3P4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
VPS8Q8N3P4 HIST1H2APS4-201ENST00000362070 348 ntBASIC30.21■■■□□ 2.43
VPS8Q8N3P4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC30.21■■■□□ 2.43
VPS8Q8N3P4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC30.21■■■□□ 2.43
VPS8Q8N3P4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC30.2■■■□□ 2.43
VPS8Q8N3P4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
VPS8Q8N3P4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
VPS8Q8N3P4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC30.2■■■□□ 2.43
VPS8Q8N3P4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
VPS8Q8N3P4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
VPS8Q8N3P4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC30.2■■■□□ 2.43
VPS8Q8N3P4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
VPS8Q8N3P4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
VPS8Q8N3P4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.42
VPS8Q8N3P4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
VPS8Q8N3P4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
VPS8Q8N3P4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC30.2■■■□□ 2.42
VPS8Q8N3P4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
VPS8Q8N3P4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
VPS8Q8N3P4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
VPS8Q8N3P4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
VPS8Q8N3P4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC30.19■■■□□ 2.42
VPS8Q8N3P4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
VPS8Q8N3P4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC30.19■■■□□ 2.42
VPS8Q8N3P4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
VPS8Q8N3P4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
VPS8Q8N3P4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC30.19■■■□□ 2.42
VPS8Q8N3P4 TERF1P1-201ENST00000311003 1181 ntBASIC30.19■■■□□ 2.42
VPS8Q8N3P4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
VPS8Q8N3P4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
VPS8Q8N3P4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
VPS8Q8N3P4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
VPS8Q8N3P4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC30.19■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms