Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 SDHAP1-207ENST00000440850 2000 ntBASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 C1QBPP2-201ENST00000528754 825 ntBASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 AC110285.5-201ENST00000611501 352 ntBASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC116Q8IYX3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 LINC01465-201ENST00000408887 1940 ntBASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 KRT16P5-201ENST00000455284 522 ntBASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 AC133681.1-201ENST00000465482 601 ntBASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CCDC116Q8IYX3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms