Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 KRT8P11-201ENST00000409686 1436 ntBASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 TERF1P1-201ENST00000311003 1181 ntBASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 TMPOP1-202ENST00000424642 1267 ntBASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 CKBP1-201ENST00000565489 1086 ntBASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 FAM87A-204ENST00000613235 858 ntBASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.49■■□□□ 1.03
CCDC60Q8IWA6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC60Q8IWA6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CCDC60Q8IWA6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC60Q8IWA6 AC073508.3-201ENST00000619697 1419 ntBASIC21.48■■□□□ 1.03
CCDC60Q8IWA6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.48■■□□□ 1.03
CCDC60Q8IWA6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC60Q8IWA6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC60Q8IWA6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC60Q8IWA6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
CCDC60Q8IWA6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC60Q8IWA6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
CCDC60Q8IWA6 KRT18P57-201ENST00000443599 1254 ntBASIC21.48■■□□□ 1.03
CCDC60Q8IWA6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CCDC60Q8IWA6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
CCDC60Q8IWA6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC60Q8IWA6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.48■■□□□ 1.03
CCDC60Q8IWA6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC60Q8IWA6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
CCDC60Q8IWA6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC60Q8IWA6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC60Q8IWA6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC60Q8IWA6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC60Q8IWA6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC60Q8IWA6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC60Q8IWA6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC60Q8IWA6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CCDC60Q8IWA6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC60Q8IWA6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.47■■□□□ 1.03
CCDC60Q8IWA6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC60Q8IWA6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC60Q8IWA6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC60Q8IWA6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.47■■□□□ 1.03
CCDC60Q8IWA6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC60Q8IWA6 MIR1224-201ENST00000408193 85 ntBASIC21.47■■□□□ 1.03
CCDC60Q8IWA6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC60Q8IWA6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC60Q8IWA6 AC010203.1-204ENST00000548782 407 ntBASIC21.47■■□□□ 1.03
CCDC60Q8IWA6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
CCDC60Q8IWA6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC60Q8IWA6 AC092865.7-201ENST00000641832 219 ntBASIC21.47■■□□□ 1.03
CCDC60Q8IWA6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC60Q8IWA6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC60Q8IWA6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CCDC60Q8IWA6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC60Q8IWA6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
CCDC60Q8IWA6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CCDC60Q8IWA6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC60Q8IWA6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC60Q8IWA6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC60Q8IWA6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC60Q8IWA6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC60Q8IWA6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC60Q8IWA6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC60Q8IWA6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC60Q8IWA6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC60Q8IWA6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC60Q8IWA6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CCDC60Q8IWA6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC60Q8IWA6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.46■■□□□ 1.03
CCDC60Q8IWA6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.46■■□□□ 1.03
CCDC60Q8IWA6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.46■■□□□ 1.03
CCDC60Q8IWA6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CCDC60Q8IWA6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.46■■□□□ 1.03
CCDC60Q8IWA6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC60Q8IWA6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC60Q8IWA6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
CCDC60Q8IWA6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC60Q8IWA6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC60Q8IWA6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms