Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM50Q86XT4 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.54■■□□□ 1.04
TRIM50Q86XT4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
TRIM50Q86XT4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TRIM50Q86XT4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.54■■□□□ 1.04
TRIM50Q86XT4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM50Q86XT4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM50Q86XT4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM50Q86XT4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM50Q86XT4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM50Q86XT4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
TRIM50Q86XT4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.53■■□□□ 1.04
TRIM50Q86XT4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM50Q86XT4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM50Q86XT4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.53■■□□□ 1.04
TRIM50Q86XT4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.53■■□□□ 1.04
TRIM50Q86XT4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.53■■□□□ 1.04
TRIM50Q86XT4 AC007663.1-201ENST00000438948 1240 ntBASIC21.53■■□□□ 1.04
TRIM50Q86XT4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.53■■□□□ 1.04
TRIM50Q86XT4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM50Q86XT4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
TRIM50Q86XT4 WWOX-216ENST00000569818 525 ntBASIC21.53■■□□□ 1.04
TRIM50Q86XT4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.53■■□□□ 1.04
TRIM50Q86XT4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM50Q86XT4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
TRIM50Q86XT4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM50Q86XT4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM50Q86XT4 PCDHAC2-203ENST00000615316 3011 ntBASIC21.53■■□□□ 1.04
TRIM50Q86XT4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.52■■□□□ 1.04
TRIM50Q86XT4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.52■■□□□ 1.04
TRIM50Q86XT4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM50Q86XT4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM50Q86XT4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.52■■□□□ 1.04
TRIM50Q86XT4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM50Q86XT4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM50Q86XT4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM50Q86XT4 SLC25A1P2-201ENST00000430693 912 ntBASIC21.52■■□□□ 1.04
TRIM50Q86XT4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM50Q86XT4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.52■■□□□ 1.04
TRIM50Q86XT4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM50Q86XT4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.52■■□□□ 1.04
TRIM50Q86XT4 NTF6B-201ENST00000591913 560 ntBASIC21.52■■□□□ 1.04
TRIM50Q86XT4 AL023803.3-201ENST00000615559 522 ntBASIC21.52■■□□□ 1.04
TRIM50Q86XT4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.52■■□□□ 1.04
TRIM50Q86XT4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM50Q86XT4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM50Q86XT4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.52■■□□□ 1.04
TRIM50Q86XT4 AC092338.2-201ENST00000568827 1415 ntBASIC21.52■■□□□ 1.04
TRIM50Q86XT4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM50Q86XT4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM50Q86XT4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
TRIM50Q86XT4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM50Q86XT4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TRIM50Q86XT4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
TRIM50Q86XT4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.52■■□□□ 1.03
TRIM50Q86XT4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
TRIM50Q86XT4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.03
TRIM50Q86XT4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
TRIM50Q86XT4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.51■■□□□ 1.03
TRIM50Q86XT4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM50Q86XT4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM50Q86XT4 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.51■■□□□ 1.03
TRIM50Q86XT4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM50Q86XT4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM50Q86XT4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM50Q86XT4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.51■■□□□ 1.03
TRIM50Q86XT4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM50Q86XT4 HMGA1P5-201ENST00000412453 271 ntBASIC21.51■■□□□ 1.03
TRIM50Q86XT4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.51■■□□□ 1.03
TRIM50Q86XT4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.51■■□□□ 1.03
TRIM50Q86XT4 CCR12P-201ENST00000446203 998 ntBASIC21.51■■□□□ 1.03
TRIM50Q86XT4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.51■■□□□ 1.03
TRIM50Q86XT4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM50Q86XT4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM50Q86XT4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM50Q86XT4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TRIM50Q86XT4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.5■■□□□ 1.03
TRIM50Q86XT4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM50Q86XT4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM50Q86XT4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TRIM50Q86XT4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM50Q86XT4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM50Q86XT4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TRIM50Q86XT4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
TRIM50Q86XT4 CKBP1-201ENST00000565489 1086 ntBASIC21.5■■□□□ 1.03
TRIM50Q86XT4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TRIM50Q86XT4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.5■■□□□ 1.03
TRIM50Q86XT4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TRIM50Q86XT4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM50Q86XT4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM50Q86XT4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM50Q86XT4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM50Q86XT4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM50Q86XT4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM50Q86XT4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.49■■□□□ 1.03
TRIM50Q86XT4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM50Q86XT4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.49■■□□□ 1.03
TRIM50Q86XT4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.49■■□□□ 1.03
TRIM50Q86XT4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM50Q86XT4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms