Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSMD2Q7Z408 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSMD2Q7Z408 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.32■□□□□ 0.2
CSMD2Q7Z408 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.32■□□□□ 0.2
CSMD2Q7Z408 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSMD2Q7Z408 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.32■□□□□ 0.2
CSMD2Q7Z408 DPP3P2-201ENST00000416030 1696 ntBASIC16.32■□□□□ 0.2
CSMD2Q7Z408 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSMD2Q7Z408 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSMD2Q7Z408 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSMD2Q7Z408 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSMD2Q7Z408 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.31■□□□□ 0.2
CSMD2Q7Z408 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CSMD2Q7Z408 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.31■□□□□ 0.2
CSMD2Q7Z408 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.31■□□□□ 0.2
CSMD2Q7Z408 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.31■□□□□ 0.2
CSMD2Q7Z408 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSMD2Q7Z408 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
CSMD2Q7Z408 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.31■□□□□ 0.2
CSMD2Q7Z408 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSMD2Q7Z408 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.31■□□□□ 0.2
CSMD2Q7Z408 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.31■□□□□ 0.2
CSMD2Q7Z408 TUBB8P6-201ENST00000436895 1288 ntBASIC16.31■□□□□ 0.2
CSMD2Q7Z408 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
CSMD2Q7Z408 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.31■□□□□ 0.2
CSMD2Q7Z408 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.31■□□□□ 0.2
CSMD2Q7Z408 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSMD2Q7Z408 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSMD2Q7Z408 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSMD2Q7Z408 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSMD2Q7Z408 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.31■□□□□ 0.2
CSMD2Q7Z408 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSMD2Q7Z408 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSMD2Q7Z408 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSMD2Q7Z408 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CSMD2Q7Z408 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.3■□□□□ 0.2
CSMD2Q7Z408 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CSMD2Q7Z408 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSMD2Q7Z408 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CSMD2Q7Z408 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CSMD2Q7Z408 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSMD2Q7Z408 AC133561.1-201ENST00000568600 2415 ntBASIC16.3■□□□□ 0.2
CSMD2Q7Z408 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.3■□□□□ 0.2
CSMD2Q7Z408 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSMD2Q7Z408 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSMD2Q7Z408 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.3■□□□□ 0.2
CSMD2Q7Z408 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSMD2Q7Z408 AC012615.1-201ENST00000565797 1299 ntBASIC16.3■□□□□ 0.2
CSMD2Q7Z408 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.3■□□□□ 0.2
CSMD2Q7Z408 TMEM179-206ENST00000616017 1645 ntBASIC16.3■□□□□ 0.2
CSMD2Q7Z408 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSMD2Q7Z408 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CSMD2Q7Z408 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSMD2Q7Z408 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CSMD2Q7Z408 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSMD2Q7Z408 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSMD2Q7Z408 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSMD2Q7Z408 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CSMD2Q7Z408 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.29■□□□□ 0.2
CSMD2Q7Z408 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.29■□□□□ 0.2
CSMD2Q7Z408 RASA4DP-201ENST00000460726 1199 ntBASIC16.29■□□□□ 0.2
CSMD2Q7Z408 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.29■□□□□ 0.2
CSMD2Q7Z408 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CSMD2Q7Z408 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSMD2Q7Z408 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CSMD2Q7Z408 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CSMD2Q7Z408 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CSMD2Q7Z408 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSMD2Q7Z408 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.29■□□□□ 0.2
CSMD2Q7Z408 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CSMD2Q7Z408 AL121672.3-201ENST00000608644 468 ntBASIC16.29■□□□□ 0.2
CSMD2Q7Z408 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.29■□□□□ 0.2
CSMD2Q7Z408 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSMD2Q7Z408 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSMD2Q7Z408 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.29■□□□□ 0.2
CSMD2Q7Z408 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
CSMD2Q7Z408 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSMD2Q7Z408 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.29■□□□□ 0.2
CSMD2Q7Z408 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.29■□□□□ 0.2
CSMD2Q7Z408 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.29■□□□□ 0.2
CSMD2Q7Z408 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CSMD2Q7Z408 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSMD2Q7Z408 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSMD2Q7Z408 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSMD2Q7Z408 TOB2P1-201ENST00000469761 992 ntBASIC16.28■□□□□ 0.2
CSMD2Q7Z408 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.28■□□□□ 0.2
CSMD2Q7Z408 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CSMD2Q7Z408 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.28■□□□□ 0.2
CSMD2Q7Z408 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CSMD2Q7Z408 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CSMD2Q7Z408 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSMD2Q7Z408 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.28■□□□□ 0.2
CSMD2Q7Z408 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.28■□□□□ 0.2
CSMD2Q7Z408 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSMD2Q7Z408 CHCHD2P8-201ENST00000429873 447 ntBASIC16.28■□□□□ 0.2
CSMD2Q7Z408 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.28■□□□□ 0.2
CSMD2Q7Z408 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.28■□□□□ 0.2
CSMD2Q7Z408 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.28■□□□□ 0.2
CSMD2Q7Z408 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSMD2Q7Z408 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms