Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC012618.2-201ENST00000428058 849 ntBASIC19.41■□□□□ 0.7
LYSMD3Q7Z3D4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.41■□□□□ 0.7
LYSMD3Q7Z3D4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.41■□□□□ 0.7
LYSMD3Q7Z3D4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.41■□□□□ 0.7
LYSMD3Q7Z3D4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.41■□□□□ 0.7
LYSMD3Q7Z3D4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LYSMD3Q7Z3D4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LYSMD3Q7Z3D4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LYSMD3Q7Z3D4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LYSMD3Q7Z3D4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LYSMD3Q7Z3D4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LYSMD3Q7Z3D4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD3Q7Z3D4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD3Q7Z3D4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.4■□□□□ 0.7
LYSMD3Q7Z3D4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD3Q7Z3D4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD3Q7Z3D4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD3Q7Z3D4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD3Q7Z3D4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD3Q7Z3D4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LYSMD3Q7Z3D4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.4■□□□□ 0.7
LYSMD3Q7Z3D4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.4■□□□□ 0.7
LYSMD3Q7Z3D4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.4■□□□□ 0.7
LYSMD3Q7Z3D4 AC233702.5-201ENST00000584107 538 ntBASIC19.4■□□□□ 0.7
LYSMD3Q7Z3D4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.4■□□□□ 0.7
LYSMD3Q7Z3D4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD3Q7Z3D4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.4■□□□□ 0.7
LYSMD3Q7Z3D4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD3Q7Z3D4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD3Q7Z3D4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD3Q7Z3D4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LYSMD3Q7Z3D4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
LYSMD3Q7Z3D4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD3Q7Z3D4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD3Q7Z3D4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD3Q7Z3D4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.4■□□□□ 0.7
LYSMD3Q7Z3D4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
LYSMD3Q7Z3D4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LYSMD3Q7Z3D4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LYSMD3Q7Z3D4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LYSMD3Q7Z3D4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.39■□□□□ 0.69
LYSMD3Q7Z3D4 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.39■□□□□ 0.69
LYSMD3Q7Z3D4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
LYSMD3Q7Z3D4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.39■□□□□ 0.69
LYSMD3Q7Z3D4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.39■□□□□ 0.69
LYSMD3Q7Z3D4 AC073195.1-201ENST00000607241 877 ntBASIC19.39■□□□□ 0.69
LYSMD3Q7Z3D4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.39■□□□□ 0.69
LYSMD3Q7Z3D4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LYSMD3Q7Z3D4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.39■□□□□ 0.69
LYSMD3Q7Z3D4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LYSMD3Q7Z3D4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LYSMD3Q7Z3D4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LYSMD3Q7Z3D4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
LYSMD3Q7Z3D4 AC104417.2-201ENST00000562989 1793 ntBASIC19.39■□□□□ 0.69
LYSMD3Q7Z3D4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.39■□□□□ 0.69
LYSMD3Q7Z3D4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.39■□□□□ 0.69
LYSMD3Q7Z3D4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LYSMD3Q7Z3D4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LYSMD3Q7Z3D4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.39■□□□□ 0.69
LYSMD3Q7Z3D4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
LYSMD3Q7Z3D4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
LYSMD3Q7Z3D4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LYSMD3Q7Z3D4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
LYSMD3Q7Z3D4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.38■□□□□ 0.69
LYSMD3Q7Z3D4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LYSMD3Q7Z3D4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LYSMD3Q7Z3D4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.38■□□□□ 0.69
LYSMD3Q7Z3D4 KSR1P1-201ENST00000446298 240 ntBASIC19.38■□□□□ 0.69
LYSMD3Q7Z3D4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LYSMD3Q7Z3D4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LYSMD3Q7Z3D4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LYSMD3Q7Z3D4 AC093484.2-201ENST00000580996 2166 ntBASIC19.38■□□□□ 0.69
LYSMD3Q7Z3D4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
LYSMD3Q7Z3D4 AL445675.2-201ENST00000620291 557 ntBASIC19.38■□□□□ 0.69
LYSMD3Q7Z3D4 AC113410.3-201ENST00000623366 203 ntBASIC19.38■□□□□ 0.69
LYSMD3Q7Z3D4 CR392000.1-201ENST00000624770 1228 ntBASIC19.38■□□□□ 0.69
LYSMD3Q7Z3D4 AL049637.2-201ENST00000641778 930 ntBASIC19.38■□□□□ 0.69
LYSMD3Q7Z3D4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
LYSMD3Q7Z3D4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LYSMD3Q7Z3D4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
LYSMD3Q7Z3D4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD3Q7Z3D4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD3Q7Z3D4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD3Q7Z3D4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
LYSMD3Q7Z3D4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
LYSMD3Q7Z3D4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD3Q7Z3D4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD3Q7Z3D4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD3Q7Z3D4 FAM197Y1-201ENST00000421178 764 ntBASIC19.37■□□□□ 0.69
LYSMD3Q7Z3D4 AL596275.1-201ENST00000423464 877 ntBASIC19.37■□□□□ 0.69
LYSMD3Q7Z3D4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LYSMD3Q7Z3D4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD3Q7Z3D4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD3Q7Z3D4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.37■□□□□ 0.69
LYSMD3Q7Z3D4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
LYSMD3Q7Z3D4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD3Q7Z3D4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD3Q7Z3D4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
LYSMD3Q7Z3D4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.37■□□□□ 0.69
LYSMD3Q7Z3D4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms