Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COPS6Q7L5N1 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC24.41■■□□□ 1.5
COPS6Q7L5N1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
COPS6Q7L5N1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COPS6Q7L5N1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC24.41■■□□□ 1.5
COPS6Q7L5N1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
COPS6Q7L5N1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC24.41■■□□□ 1.5
COPS6Q7L5N1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC24.41■■□□□ 1.5
COPS6Q7L5N1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC24.41■■□□□ 1.5
COPS6Q7L5N1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COPS6Q7L5N1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC24.41■■□□□ 1.5
COPS6Q7L5N1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC24.41■■□□□ 1.5
COPS6Q7L5N1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COPS6Q7L5N1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC24.41■■□□□ 1.5
COPS6Q7L5N1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
COPS6Q7L5N1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC24.41■■□□□ 1.5
COPS6Q7L5N1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC24.41■■□□□ 1.5
COPS6Q7L5N1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
COPS6Q7L5N1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC24.4■■□□□ 1.5
COPS6Q7L5N1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC24.4■■□□□ 1.5
COPS6Q7L5N1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
COPS6Q7L5N1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
COPS6Q7L5N1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COPS6Q7L5N1 AK4P3-201ENST00000418260 669 ntBASIC24.4■■□□□ 1.5
COPS6Q7L5N1 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC24.4■■□□□ 1.5
COPS6Q7L5N1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COPS6Q7L5N1 AC139887.4-201ENST00000607877 719 ntBASIC24.4■■□□□ 1.5
COPS6Q7L5N1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC24.4■■□□□ 1.5
COPS6Q7L5N1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COPS6Q7L5N1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC24.4■■□□□ 1.5
COPS6Q7L5N1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COPS6Q7L5N1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COPS6Q7L5N1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
COPS6Q7L5N1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COPS6Q7L5N1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COPS6Q7L5N1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
COPS6Q7L5N1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
COPS6Q7L5N1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
COPS6Q7L5N1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
COPS6Q7L5N1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
COPS6Q7L5N1 SDHAP1-207ENST00000440850 2000 ntBASIC24.39■■□□□ 1.5
COPS6Q7L5N1 PCDHAC2-203ENST00000615316 3011 ntBASIC24.39■■□□□ 1.5
COPS6Q7L5N1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC24.39■■□□□ 1.5
COPS6Q7L5N1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC24.39■■□□□ 1.5
COPS6Q7L5N1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.5
COPS6Q7L5N1 CD70-202ENST00000423145 881 ntTSL 2 BASIC24.39■■□□□ 1.49
COPS6Q7L5N1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC24.39■■□□□ 1.49
COPS6Q7L5N1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC24.39■■□□□ 1.49
COPS6Q7L5N1 PRSS44-201ENST00000515154 1146 ntBASIC24.39■■□□□ 1.49
COPS6Q7L5N1 AP003041.3-201ENST00000527151 707 ntBASIC24.39■■□□□ 1.49
COPS6Q7L5N1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC24.39■■□□□ 1.49
COPS6Q7L5N1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC24.39■■□□□ 1.49
COPS6Q7L5N1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC24.39■■□□□ 1.49
COPS6Q7L5N1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.49
COPS6Q7L5N1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
COPS6Q7L5N1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
COPS6Q7L5N1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC24.39■■□□□ 1.49
COPS6Q7L5N1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
COPS6Q7L5N1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
COPS6Q7L5N1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
COPS6Q7L5N1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COPS6Q7L5N1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COPS6Q7L5N1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COPS6Q7L5N1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COPS6Q7L5N1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COPS6Q7L5N1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC24.38■■□□□ 1.49
COPS6Q7L5N1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC24.38■■□□□ 1.49
COPS6Q7L5N1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC24.38■■□□□ 1.49
COPS6Q7L5N1 GXYLT1P6-201ENST00000456472 1187 ntBASIC24.38■■□□□ 1.49
COPS6Q7L5N1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
COPS6Q7L5N1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC24.38■■□□□ 1.49
COPS6Q7L5N1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC24.38■■□□□ 1.49
COPS6Q7L5N1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
COPS6Q7L5N1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COPS6Q7L5N1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COPS6Q7L5N1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
COPS6Q7L5N1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC24.38■■□□□ 1.49
COPS6Q7L5N1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC24.38■■□□□ 1.49
COPS6Q7L5N1 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COPS6Q7L5N1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
COPS6Q7L5N1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC24.37■■□□□ 1.49
COPS6Q7L5N1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COPS6Q7L5N1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
COPS6Q7L5N1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COPS6Q7L5N1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COPS6Q7L5N1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COPS6Q7L5N1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COPS6Q7L5N1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
COPS6Q7L5N1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COPS6Q7L5N1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC24.37■■□□□ 1.49
COPS6Q7L5N1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
COPS6Q7L5N1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
COPS6Q7L5N1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
COPS6Q7L5N1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC24.37■■□□□ 1.49
COPS6Q7L5N1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
COPS6Q7L5N1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
COPS6Q7L5N1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC24.37■■□□□ 1.49
COPS6Q7L5N1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC24.37■■□□□ 1.49
COPS6Q7L5N1 AC141257.4-201ENST00000634557 245 ntBASIC24.37■■□□□ 1.49
COPS6Q7L5N1 AC136944.6-201ENST00000634818 245 ntBASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms