Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBA1AQ71U36 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.78■□□□□ 0.44
TUBA1AQ71U36 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TUBA1AQ71U36 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.78■□□□□ 0.44
TUBA1AQ71U36 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.78■□□□□ 0.44
TUBA1AQ71U36 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBA1AQ71U36 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.78■□□□□ 0.44
TUBA1AQ71U36 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.77■□□□□ 0.44
TUBA1AQ71U36 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.77■□□□□ 0.44
TUBA1AQ71U36 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TUBA1AQ71U36 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TUBA1AQ71U36 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TUBA1AQ71U36 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TUBA1AQ71U36 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.77■□□□□ 0.44
TUBA1AQ71U36 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TUBA1AQ71U36 AC011270.2-201ENST00000624293 2550 ntBASIC17.77■□□□□ 0.44
TUBA1AQ71U36 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TUBA1AQ71U36 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TUBA1AQ71U36 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TUBA1AQ71U36 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.77■□□□□ 0.44
TUBA1AQ71U36 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.77■□□□□ 0.44
TUBA1AQ71U36 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.77■□□□□ 0.44
TUBA1AQ71U36 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.77■□□□□ 0.44
TUBA1AQ71U36 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.77■□□□□ 0.44
TUBA1AQ71U36 PCDHB18P-201ENST00000524813 2368 ntBASIC17.77■□□□□ 0.44
TUBA1AQ71U36 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.77■□□□□ 0.44
TUBA1AQ71U36 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TUBA1AQ71U36 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TUBA1AQ71U36 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
TUBA1AQ71U36 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TUBA1AQ71U36 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TUBA1AQ71U36 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TUBA1AQ71U36 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TUBA1AQ71U36 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.77■□□□□ 0.43
TUBA1AQ71U36 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.77■□□□□ 0.43
TUBA1AQ71U36 AC106820.2-201ENST00000563775 3264 ntBASIC17.76■□□□□ 0.43
TUBA1AQ71U36 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 KRT8P36-201ENST00000489121 1440 ntBASIC17.76■□□□□ 0.43
TUBA1AQ71U36 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 AC083880.1-201ENST00000608266 535 ntBASIC17.76■□□□□ 0.43
TUBA1AQ71U36 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TUBA1AQ71U36 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBA1AQ71U36 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBA1AQ71U36 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBA1AQ71U36 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.75■□□□□ 0.43
TUBA1AQ71U36 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBA1AQ71U36 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TUBA1AQ71U36 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TUBA1AQ71U36 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.75■□□□□ 0.43
TUBA1AQ71U36 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TUBA1AQ71U36 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBA1AQ71U36 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.75■□□□□ 0.43
TUBA1AQ71U36 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TUBA1AQ71U36 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBA1AQ71U36 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
TUBA1AQ71U36 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.75■□□□□ 0.43
TUBA1AQ71U36 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.75■□□□□ 0.43
TUBA1AQ71U36 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.75■□□□□ 0.43
TUBA1AQ71U36 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.75■□□□□ 0.43
TUBA1AQ71U36 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TUBA1AQ71U36 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TUBA1AQ71U36 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TUBA1AQ71U36 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.75■□□□□ 0.43
TUBA1AQ71U36 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.75■□□□□ 0.43
TUBA1AQ71U36 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBA1AQ71U36 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBA1AQ71U36 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBA1AQ71U36 AC009113.1-201ENST00000570267 2443 ntBASIC17.74■□□□□ 0.43
TUBA1AQ71U36 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms