Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 AC060766.5-201ENST00000590539 871 ntBASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 RNA5SP413-201ENST00000516373 109 ntBASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 AC092368.3-202ENST00000574180 1591 ntBASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF111Q6ZNA4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RNF111Q6ZNA4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF111Q6ZNA4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF111Q6ZNA4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF111Q6ZNA4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF111Q6ZNA4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF111Q6ZNA4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF111Q6ZNA4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF111Q6ZNA4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF111Q6ZNA4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF111Q6ZNA4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF111Q6ZNA4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF111Q6ZNA4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF111Q6ZNA4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF111Q6ZNA4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF111Q6ZNA4 AC006333.2-201ENST00000607957 2099 ntBASIC18.7■□□□□ 0.58
RNF111Q6ZNA4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF111Q6ZNA4 AC020916.1-201ENST00000587762 1774 ntBASIC18.7■□□□□ 0.58
RNF111Q6ZNA4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RNF111Q6ZNA4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF111Q6ZNA4 AC068880.1-201ENST00000507289 2297 ntBASIC18.7■□□□□ 0.58
RNF111Q6ZNA4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF111Q6ZNA4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF111Q6ZNA4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF111Q6ZNA4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF111Q6ZNA4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF111Q6ZNA4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF111Q6ZNA4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF111Q6ZNA4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RNF111Q6ZNA4 AL390719.1-204ENST00000412397 1219 ntBASIC18.69■□□□□ 0.58
RNF111Q6ZNA4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF111Q6ZNA4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF111Q6ZNA4 AC023632.3-201ENST00000521633 145 ntBASIC18.69■□□□□ 0.58
RNF111Q6ZNA4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF111Q6ZNA4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF111Q6ZNA4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF111Q6ZNA4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RNF111Q6ZNA4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF111Q6ZNA4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RNF111Q6ZNA4 NOC2LP2-201ENST00000407594 1944 ntBASIC18.68■□□□□ 0.58
RNF111Q6ZNA4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF111Q6ZNA4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF111Q6ZNA4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RNF111Q6ZNA4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms