Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PPP4R3CPQ6ZMV5 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP4R3CPQ6ZMV5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
PPP4R3CPQ6ZMV5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.15■■□□□ 1.14
PPP4R3CPQ6ZMV5 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP4R3CPQ6ZMV5 MTND2P12-201ENST00000417560 1252 ntBASIC22.15■■□□□ 1.14
PPP4R3CPQ6ZMV5 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PPP4R3CPQ6ZMV5 AC131097.1-201ENST00000437438 739 ntTSL 3 BASIC22.15■■□□□ 1.14
PPP4R3CPQ6ZMV5 AC128676.1-201ENST00000454392 318 ntBASIC22.15■■□□□ 1.14
PPP4R3CPQ6ZMV5 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC22.15■■□□□ 1.14
PPP4R3CPQ6ZMV5 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC22.15■■□□□ 1.14
PPP4R3CPQ6ZMV5 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC22.15■■□□□ 1.14
PPP4R3CPQ6ZMV5 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC22.15■■□□□ 1.14
PPP4R3CPQ6ZMV5 WWOX-AS1-201ENST00000567099 443 ntTSL 5 BASIC22.15■■□□□ 1.14
PPP4R3CPQ6ZMV5 KLF2-202ENST00000592003 564 ntTSL 3 BASIC22.15■■□□□ 1.14
PPP4R3CPQ6ZMV5 TCF3P1-201ENST00000423021 1937 ntBASIC22.15■■□□□ 1.14
PPP4R3CPQ6ZMV5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP4R3CPQ6ZMV5 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP4R3CPQ6ZMV5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.15■■□□□ 1.14
PPP4R3CPQ6ZMV5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.15■■□□□ 1.14
PPP4R3CPQ6ZMV5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PPP4R3CPQ6ZMV5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PPP4R3CPQ6ZMV5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PPP4R3CPQ6ZMV5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PPP4R3CPQ6ZMV5 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PPP4R3CPQ6ZMV5 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PPP4R3CPQ6ZMV5 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
PPP4R3CPQ6ZMV5 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PPP4R3CPQ6ZMV5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
PPP4R3CPQ6ZMV5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.14■■□□□ 1.13
PPP4R3CPQ6ZMV5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.14■■□□□ 1.13
PPP4R3CPQ6ZMV5 TMEM126A-201ENST00000304511 739 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PPP4R3CPQ6ZMV5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PPP4R3CPQ6ZMV5 AL358176.4-201ENST00000428891 675 ntTSL 2 BASIC22.14■■□□□ 1.13
PPP4R3CPQ6ZMV5 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.14■■□□□ 1.13
PPP4R3CPQ6ZMV5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
PPP4R3CPQ6ZMV5 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC22.14■■□□□ 1.13
PPP4R3CPQ6ZMV5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.14■■□□□ 1.13
PPP4R3CPQ6ZMV5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC22.14■■□□□ 1.13
PPP4R3CPQ6ZMV5 AC008686.1-201ENST00000586894 565 ntTSL 5 BASIC22.14■■□□□ 1.13
PPP4R3CPQ6ZMV5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PPP4R3CPQ6ZMV5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PPP4R3CPQ6ZMV5 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
PPP4R3CPQ6ZMV5 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PPP4R3CPQ6ZMV5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
PPP4R3CPQ6ZMV5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.13
PPP4R3CPQ6ZMV5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.13■■□□□ 1.13
PPP4R3CPQ6ZMV5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.13■■□□□ 1.13
PPP4R3CPQ6ZMV5 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4R3CPQ6ZMV5 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4R3CPQ6ZMV5 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4R3CPQ6ZMV5 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4R3CPQ6ZMV5 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4R3CPQ6ZMV5 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4R3CPQ6ZMV5 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4R3CPQ6ZMV5 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
PPP4R3CPQ6ZMV5 LIPK-201ENST00000404190 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4R3CPQ6ZMV5 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC22.13■■□□□ 1.13
PPP4R3CPQ6ZMV5 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC22.13■■□□□ 1.13
PPP4R3CPQ6ZMV5 VBP1-203ENST00000535916 944 ntTSL 2 BASIC22.13■■□□□ 1.13
PPP4R3CPQ6ZMV5 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4R3CPQ6ZMV5 AC008687.6-201ENST00000596318 630 ntBASIC22.13■■□□□ 1.13
PPP4R3CPQ6ZMV5 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
PPP4R3CPQ6ZMV5 AC073648.6-201ENST00000641589 218 ntBASIC22.13■■□□□ 1.13
PPP4R3CPQ6ZMV5 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.13■■□□□ 1.13
PPP4R3CPQ6ZMV5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC22.13■■□□□ 1.13
PPP4R3CPQ6ZMV5 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4R3CPQ6ZMV5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.13■■□□□ 1.13
PPP4R3CPQ6ZMV5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.13■■□□□ 1.13
PPP4R3CPQ6ZMV5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4R3CPQ6ZMV5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4R3CPQ6ZMV5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC22.13■■□□□ 1.13
PPP4R3CPQ6ZMV5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC22.12■■□□□ 1.13
PPP4R3CPQ6ZMV5 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4R3CPQ6ZMV5 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.12■■□□□ 1.13
PPP4R3CPQ6ZMV5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4R3CPQ6ZMV5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
PPP4R3CPQ6ZMV5 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4R3CPQ6ZMV5 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.12■■□□□ 1.13
PPP4R3CPQ6ZMV5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC22.12■■□□□ 1.13
PPP4R3CPQ6ZMV5 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4R3CPQ6ZMV5 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4R3CPQ6ZMV5 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
PPP4R3CPQ6ZMV5 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4R3CPQ6ZMV5 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC22.12■■□□□ 1.13
PPP4R3CPQ6ZMV5 AC023632.3-201ENST00000521633 145 ntBASIC22.12■■□□□ 1.13
PPP4R3CPQ6ZMV5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC22.12■■□□□ 1.13
PPP4R3CPQ6ZMV5 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.12■■□□□ 1.13
PPP4R3CPQ6ZMV5 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.12■■□□□ 1.13
PPP4R3CPQ6ZMV5 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC22.12■■□□□ 1.13
PPP4R3CPQ6ZMV5 AL049840.6-202ENST00000603373 279 ntBASIC22.12■■□□□ 1.13
PPP4R3CPQ6ZMV5 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4R3CPQ6ZMV5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4R3CPQ6ZMV5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4R3CPQ6ZMV5 BX119927.1-201ENST00000636596 1552 ntBASIC22.12■■□□□ 1.13
PPP4R3CPQ6ZMV5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms