Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PACS1Q6VY07 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PACS1Q6VY07 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PACS1Q6VY07 TEX21P-204ENST00000641479 1693 ntBASIC19.49■□□□□ 0.71
PACS1Q6VY07 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PACS1Q6VY07 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PACS1Q6VY07 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PACS1Q6VY07 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PACS1Q6VY07 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PACS1Q6VY07 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PACS1Q6VY07 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PACS1Q6VY07 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PACS1Q6VY07 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.49■□□□□ 0.71
PACS1Q6VY07 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.49■□□□□ 0.71
PACS1Q6VY07 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PACS1Q6VY07 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PACS1Q6VY07 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PACS1Q6VY07 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.49■□□□□ 0.71
PACS1Q6VY07 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.49■□□□□ 0.71
PACS1Q6VY07 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.49■□□□□ 0.71
PACS1Q6VY07 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PACS1Q6VY07 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.49■□□□□ 0.71
PACS1Q6VY07 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.49■□□□□ 0.71
PACS1Q6VY07 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PACS1Q6VY07 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PACS1Q6VY07 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PACS1Q6VY07 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PACS1Q6VY07 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PACS1Q6VY07 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.48■□□□□ 0.71
PACS1Q6VY07 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PACS1Q6VY07 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PACS1Q6VY07 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.48■□□□□ 0.71
PACS1Q6VY07 ESRRAP1-201ENST00000400596 1257 ntBASIC19.48■□□□□ 0.71
PACS1Q6VY07 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
PACS1Q6VY07 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PACS1Q6VY07 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.48■□□□□ 0.71
PACS1Q6VY07 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.48■□□□□ 0.71
PACS1Q6VY07 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PACS1Q6VY07 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PACS1Q6VY07 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.48■□□□□ 0.71
PACS1Q6VY07 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.48■□□□□ 0.71
PACS1Q6VY07 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PACS1Q6VY07 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PACS1Q6VY07 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.48■□□□□ 0.71
PACS1Q6VY07 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
PACS1Q6VY07 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PACS1Q6VY07 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PACS1Q6VY07 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PACS1Q6VY07 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PACS1Q6VY07 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PACS1Q6VY07 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
PACS1Q6VY07 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.47■□□□□ 0.71
PACS1Q6VY07 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PACS1Q6VY07 AC141586.3-201ENST00000562166 1838 ntBASIC19.47■□□□□ 0.71
PACS1Q6VY07 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.47■□□□□ 0.71
PACS1Q6VY07 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PACS1Q6VY07 KRT17P3-201ENST00000420566 1262 ntBASIC19.47■□□□□ 0.71
PACS1Q6VY07 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.47■□□□□ 0.71
PACS1Q6VY07 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.47■□□□□ 0.71
PACS1Q6VY07 AC069544.1-201ENST00000609399 999 ntBASIC19.47■□□□□ 0.71
PACS1Q6VY07 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PACS1Q6VY07 ZNF815P-204ENST00000434898 1737 ntBASIC19.47■□□□□ 0.71
PACS1Q6VY07 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PACS1Q6VY07 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PACS1Q6VY07 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PACS1Q6VY07 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PACS1Q6VY07 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PACS1Q6VY07 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PACS1Q6VY07 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.47■□□□□ 0.71
PACS1Q6VY07 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PACS1Q6VY07 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PACS1Q6VY07 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PACS1Q6VY07 AL049812.1-201ENST00000432563 2267 ntBASIC19.46■□□□□ 0.71
PACS1Q6VY07 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PACS1Q6VY07 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.46■□□□□ 0.71
PACS1Q6VY07 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PACS1Q6VY07 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PACS1Q6VY07 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PACS1Q6VY07 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.46■□□□□ 0.71
PACS1Q6VY07 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
PACS1Q6VY07 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PACS1Q6VY07 AC026471.1-201ENST00000564629 3026 ntBASIC19.46■□□□□ 0.71
PACS1Q6VY07 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
PACS1Q6VY07 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.46■□□□□ 0.71
PACS1Q6VY07 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.46■□□□□ 0.71
PACS1Q6VY07 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.46■□□□□ 0.71
PACS1Q6VY07 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.46■□□□□ 0.71
PACS1Q6VY07 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PACS1Q6VY07 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PACS1Q6VY07 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.46■□□□□ 0.71
PACS1Q6VY07 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.46■□□□□ 0.71
PACS1Q6VY07 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PACS1Q6VY07 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PACS1Q6VY07 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.46■□□□□ 0.71
PACS1Q6VY07 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PACS1Q6VY07 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PACS1Q6VY07 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PACS1Q6VY07 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.45■□□□□ 0.7
PACS1Q6VY07 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PACS1Q6VY07 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms