Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 HLA-L-209ENST00000420110 1011 ntBASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 DUSP5P2-201ENST00000426873 1033 ntBASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 AL138781.1-201ENST00000566567 1274 ntBASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 AC009053.2-201ENST00000563701 2365 ntBASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 DPP3P2-201ENST00000416030 1696 ntBASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 AC141586.5-201ENST00000624546 2050 ntBASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 AC046158.3-201ENST00000624947 2558 ntBASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 AC133041.1-202ENST00000642053 222 ntBASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM53Q6P2H8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 AL390961.4-201ENST00000623958 2535 ntBASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 AL355802.2-201ENST00000402069 882 ntBASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 AC097658.1-201ENST00000475555 843 ntBASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms