Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.87■□□□□ 0.77
ALFQ53S48 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALFQ53S48 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.87■□□□□ 0.77
ALFQ53S48 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.87■□□□□ 0.77
ALFQ53S48 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.87■□□□□ 0.77
ALFQ53S48 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALFQ53S48 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALFQ53S48 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALFQ53S48 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
ALFQ53S48 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ALFQ53S48 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
ALFQ53S48 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ALFQ53S48 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
ALFQ53S48 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
ALFQ53S48 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ALFQ53S48 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ALFQ53S48 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ALFQ53S48 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
ALFQ53S48 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ALFQ53S48 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.86■□□□□ 0.77
ALFQ53S48 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ALFQ53S48 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.86■□□□□ 0.77
ALFQ53S48 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
ALFQ53S48 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.86■□□□□ 0.77
ALFQ53S48 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.86■□□□□ 0.77
ALFQ53S48 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.86■□□□□ 0.77
ALFQ53S48 AC008040.2-201ENST00000461049 708 ntBASIC19.86■□□□□ 0.77
ALFQ53S48 B3GAT3P1-201ENST00000471720 806 ntBASIC19.86■□□□□ 0.77
ALFQ53S48 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.86■□□□□ 0.77
ALFQ53S48 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.86■□□□□ 0.77
ALFQ53S48 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ALFQ53S48 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.86■□□□□ 0.77
ALFQ53S48 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.86■□□□□ 0.77
ALFQ53S48 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
ALFQ53S48 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.86■□□□□ 0.77
ALFQ53S48 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ALFQ53S48 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.86■□□□□ 0.77
ALFQ53S48 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ALFQ53S48 RCC2P6-201ENST00000526625 1557 ntBASIC19.86■□□□□ 0.77
ALFQ53S48 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ALFQ53S48 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.86■□□□□ 0.77
ALFQ53S48 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.86■□□□□ 0.77
ALFQ53S48 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.86■□□□□ 0.77
ALFQ53S48 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.86■□□□□ 0.77
ALFQ53S48 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALFQ53S48 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALFQ53S48 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
ALFQ53S48 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALFQ53S48 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALFQ53S48 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ALFQ53S48 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALFQ53S48 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALFQ53S48 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.85■□□□□ 0.77
ALFQ53S48 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.85■□□□□ 0.77
ALFQ53S48 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.85■□□□□ 0.77
ALFQ53S48 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.85■□□□□ 0.77
ALFQ53S48 MIR6786-201ENST00000616843 113 ntBASIC19.85■□□□□ 0.77
ALFQ53S48 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.85■□□□□ 0.77
ALFQ53S48 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.85■□□□□ 0.77
ALFQ53S48 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.85■□□□□ 0.77
ALFQ53S48 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALFQ53S48 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.85■□□□□ 0.77
ALFQ53S48 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.85■□□□□ 0.77
ALFQ53S48 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.85■□□□□ 0.77
ALFQ53S48 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
ALFQ53S48 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ALFQ53S48 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ALFQ53S48 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ALFQ53S48 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.84■□□□□ 0.77
ALFQ53S48 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ALFQ53S48 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ALFQ53S48 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.84■□□□□ 0.77
ALFQ53S48 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ALFQ53S48 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ALFQ53S48 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
ALFQ53S48 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
ALFQ53S48 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ALFQ53S48 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.84■□□□□ 0.77
ALFQ53S48 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.84■□□□□ 0.77
ALFQ53S48 KRT8P41-201ENST00000533985 1514 ntBASIC19.84■□□□□ 0.77
ALFQ53S48 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ALFQ53S48 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ALFQ53S48 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.84■□□□□ 0.77
ALFQ53S48 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ALFQ53S48 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ALFQ53S48 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ALFQ53S48 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ALFQ53S48 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
ALFQ53S48 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.83■□□□□ 0.77
ALFQ53S48 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ALFQ53S48 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ALFQ53S48 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.83■□□□□ 0.77
ALFQ53S48 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.83■□□□□ 0.77
ALFQ53S48 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.83■□□□□ 0.77
ALFQ53S48 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.83■□□□□ 0.77
ALFQ53S48 FSCN1P1-201ENST00000568912 1481 ntBASIC19.83■□□□□ 0.76
ALFQ53S48 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.83■□□□□ 0.76
ALFQ53S48 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ALFQ53S48 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.83■□□□□ 0.76
ALFQ53S48 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms