Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTC1Q2NKJ3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.66■□□□□ 0.9
CTC1Q2NKJ3 HCG4P8-203ENST00000443049 980 ntBASIC20.66■□□□□ 0.9
CTC1Q2NKJ3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CTC1Q2NKJ3 AL671277.2-201ENST00000458060 996 ntBASIC20.66■□□□□ 0.9
CTC1Q2NKJ3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.66■□□□□ 0.9
CTC1Q2NKJ3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTC1Q2NKJ3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.66■□□□□ 0.9
CTC1Q2NKJ3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
CTC1Q2NKJ3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTC1Q2NKJ3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTC1Q2NKJ3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTC1Q2NKJ3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTC1Q2NKJ3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTC1Q2NKJ3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CTC1Q2NKJ3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTC1Q2NKJ3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.65■□□□□ 0.9
CTC1Q2NKJ3 PCDHAC2-203ENST00000615316 3011 ntBASIC20.65■□□□□ 0.9
CTC1Q2NKJ3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTC1Q2NKJ3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTC1Q2NKJ3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTC1Q2NKJ3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.65■□□□□ 0.9
CTC1Q2NKJ3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.65■□□□□ 0.9
CTC1Q2NKJ3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.65■□□□□ 0.9
CTC1Q2NKJ3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CTC1Q2NKJ3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.65■□□□□ 0.9
CTC1Q2NKJ3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.65■□□□□ 0.9
CTC1Q2NKJ3 HLA-A-209ENST00000638375 975 ntBASIC20.65■□□□□ 0.9
CTC1Q2NKJ3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTC1Q2NKJ3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTC1Q2NKJ3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTC1Q2NKJ3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTC1Q2NKJ3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTC1Q2NKJ3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CTC1Q2NKJ3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.64■□□□□ 0.9
CTC1Q2NKJ3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTC1Q2NKJ3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.64■□□□□ 0.9
CTC1Q2NKJ3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTC1Q2NKJ3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTC1Q2NKJ3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTC1Q2NKJ3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
CTC1Q2NKJ3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTC1Q2NKJ3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CTC1Q2NKJ3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.89
CTC1Q2NKJ3 TSPY17P-201ENST00000450329 467 ntBASIC20.64■□□□□ 0.89
CTC1Q2NKJ3 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.64■□□□□ 0.89
CTC1Q2NKJ3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.64■□□□□ 0.89
CTC1Q2NKJ3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTC1Q2NKJ3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.64■□□□□ 0.89
CTC1Q2NKJ3 AL512604.3-201ENST00000569583 964 ntBASIC20.64■□□□□ 0.89
CTC1Q2NKJ3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.64■□□□□ 0.89
CTC1Q2NKJ3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTC1Q2NKJ3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.64■□□□□ 0.89
CTC1Q2NKJ3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CTC1Q2NKJ3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTC1Q2NKJ3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.64■□□□□ 0.89
CTC1Q2NKJ3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTC1Q2NKJ3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTC1Q2NKJ3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.63■□□□□ 0.89
CTC1Q2NKJ3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.63■□□□□ 0.89
CTC1Q2NKJ3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTC1Q2NKJ3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTC1Q2NKJ3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.63■□□□□ 0.89
CTC1Q2NKJ3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTC1Q2NKJ3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTC1Q2NKJ3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTC1Q2NKJ3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.63■□□□□ 0.89
CTC1Q2NKJ3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.63■□□□□ 0.89
CTC1Q2NKJ3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.63■□□□□ 0.89
CTC1Q2NKJ3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.63■□□□□ 0.89
CTC1Q2NKJ3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.63■□□□□ 0.89
CTC1Q2NKJ3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.63■□□□□ 0.89
CTC1Q2NKJ3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.63■□□□□ 0.89
CTC1Q2NKJ3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.63■□□□□ 0.89
CTC1Q2NKJ3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTC1Q2NKJ3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTC1Q2NKJ3 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.63■□□□□ 0.89
CTC1Q2NKJ3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.63■□□□□ 0.89
CTC1Q2NKJ3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CTC1Q2NKJ3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.63■□□□□ 0.89
CTC1Q2NKJ3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTC1Q2NKJ3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.62■□□□□ 0.89
CTC1Q2NKJ3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CTC1Q2NKJ3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTC1Q2NKJ3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTC1Q2NKJ3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTC1Q2NKJ3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.62■□□□□ 0.89
CTC1Q2NKJ3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
CTC1Q2NKJ3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTC1Q2NKJ3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTC1Q2NKJ3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.62■□□□□ 0.89
CTC1Q2NKJ3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTC1Q2NKJ3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTC1Q2NKJ3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
CTC1Q2NKJ3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.62■□□□□ 0.89
CTC1Q2NKJ3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTC1Q2NKJ3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.62■□□□□ 0.89
CTC1Q2NKJ3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.62■□□□□ 0.89
CTC1Q2NKJ3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.62■□□□□ 0.89
CTC1Q2NKJ3 AL441883.1-201ENST00000566170 1045 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms