Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CACNA1EQ15878 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CACNA1EQ15878 AP000347.1-202ENST00000435868 847 ntBASIC18.83■□□□□ 0.61
CACNA1EQ15878 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.83■□□□□ 0.61
CACNA1EQ15878 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CACNA1EQ15878 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.83■□□□□ 0.61
CACNA1EQ15878 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.83■□□□□ 0.6
CACNA1EQ15878 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CACNA1EQ15878 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.83■□□□□ 0.6
CACNA1EQ15878 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.83■□□□□ 0.6
CACNA1EQ15878 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA1EQ15878 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CACNA1EQ15878 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.82■□□□□ 0.6
CACNA1EQ15878 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA1EQ15878 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.82■□□□□ 0.6
CACNA1EQ15878 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.82■□□□□ 0.6
CACNA1EQ15878 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.82■□□□□ 0.6
CACNA1EQ15878 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.82■□□□□ 0.6
CACNA1EQ15878 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA1EQ15878 GPALPP1-207ENST00000611650 899 ntBASIC18.82■□□□□ 0.6
CACNA1EQ15878 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA1EQ15878 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA1EQ15878 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA1EQ15878 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA1EQ15878 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.82■□□□□ 0.6
CACNA1EQ15878 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CACNA1EQ15878 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA1EQ15878 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA1EQ15878 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.82■□□□□ 0.6
CACNA1EQ15878 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.82■□□□□ 0.6
CACNA1EQ15878 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
CACNA1EQ15878 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.81■□□□□ 0.6
CACNA1EQ15878 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA1EQ15878 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA1EQ15878 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CACNA1EQ15878 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.81■□□□□ 0.6
CACNA1EQ15878 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA1EQ15878 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA1EQ15878 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA1EQ15878 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA1EQ15878 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
CACNA1EQ15878 GCSHP2-201ENST00000560971 527 ntBASIC18.81■□□□□ 0.6
CACNA1EQ15878 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA1EQ15878 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.81■□□□□ 0.6
CACNA1EQ15878 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.81■□□□□ 0.6
CACNA1EQ15878 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
CACNA1EQ15878 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA1EQ15878 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CACNA1EQ15878 AC073314.1-201ENST00000568729 2216 ntBASIC18.81■□□□□ 0.6
CACNA1EQ15878 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CACNA1EQ15878 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA1EQ15878 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.81■□□□□ 0.6
CACNA1EQ15878 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.81■□□□□ 0.6
CACNA1EQ15878 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA1EQ15878 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.81■□□□□ 0.6
CACNA1EQ15878 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CACNA1EQ15878 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CACNA1EQ15878 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA1EQ15878 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA1EQ15878 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA1EQ15878 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.8■□□□□ 0.6
CACNA1EQ15878 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.8■□□□□ 0.6
CACNA1EQ15878 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.8■□□□□ 0.6
CACNA1EQ15878 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CACNA1EQ15878 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.8■□□□□ 0.6
CACNA1EQ15878 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA1EQ15878 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA1EQ15878 AP005212.1-201ENST00000581547 1997 ntBASIC18.8■□□□□ 0.6
CACNA1EQ15878 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.8■□□□□ 0.6
CACNA1EQ15878 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA1EQ15878 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA1EQ15878 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA1EQ15878 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.8■□□□□ 0.6
CACNA1EQ15878 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.8■□□□□ 0.6
CACNA1EQ15878 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA1EQ15878 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.8■□□□□ 0.6
CACNA1EQ15878 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.8■□□□□ 0.6
CACNA1EQ15878 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA1EQ15878 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.8■□□□□ 0.6
CACNA1EQ15878 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CACNA1EQ15878 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA1EQ15878 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA1EQ15878 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.8■□□□□ 0.6
CACNA1EQ15878 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA1EQ15878 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CACNA1EQ15878 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA1EQ15878 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA1EQ15878 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA1EQ15878 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA1EQ15878 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA1EQ15878 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA1EQ15878 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.79■□□□□ 0.6
CACNA1EQ15878 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA1EQ15878 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.79■□□□□ 0.6
CACNA1EQ15878 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA1EQ15878 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA1EQ15878 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
CACNA1EQ15878 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA1EQ15878 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.79■□□□□ 0.6
CACNA1EQ15878 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms