Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.01□□□□□ -0.17
PRKDCP78527 RNF126P1-202ENST00000569893 925 ntBASIC14.01□□□□□ -0.17
PRKDCP78527 AC027601.4-201ENST00000611259 610 ntBASIC14.01□□□□□ -0.17
PRKDCP78527 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.01□□□□□ -0.17
PRKDCP78527 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
PRKDCP78527 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PRKDCP78527 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
PRKDCP78527 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PRKDCP78527 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC14.01□□□□□ -0.17
PRKDCP78527 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PRKDCP78527 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PRKDCP78527 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
PRKDCP78527 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.01□□□□□ -0.17
PRKDCP78527 AC104819.1-201ENST00000504587 486 ntBASIC14.01□□□□□ -0.17
PRKDCP78527 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PRKDCP78527 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PRKDCP78527 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PRKDCP78527 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRKDCP78527 FICD-205ENST00000552758 603 ntTSL 2 BASIC14□□□□□ -0.17
PRKDCP78527 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRKDCP78527 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14□□□□□ -0.17
PRKDCP78527 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PRKDCP78527 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRKDCP78527 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14□□□□□ -0.17
PRKDCP78527 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRKDCP78527 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14□□□□□ -0.17
PRKDCP78527 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14□□□□□ -0.17
PRKDCP78527 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRKDCP78527 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14□□□□□ -0.17
PRKDCP78527 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14□□□□□ -0.17
PRKDCP78527 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14□□□□□ -0.17
PRKDCP78527 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14□□□□□ -0.17
PRKDCP78527 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14□□□□□ -0.17
PRKDCP78527 EMD-201ENST00000369835 966 ntTSL 3 BASIC14□□□□□ -0.17
PRKDCP78527 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PRKDCP78527 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14□□□□□ -0.17
PRKDCP78527 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
PRKDCP78527 Z83836.1-201ENST00000624605 1642 ntBASIC14□□□□□ -0.17
PRKDCP78527 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14□□□□□ -0.17
PRKDCP78527 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14□□□□□ -0.17
PRKDCP78527 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14□□□□□ -0.17
PRKDCP78527 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14□□□□□ -0.17
PRKDCP78527 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRKDCP78527 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14□□□□□ -0.17
PRKDCP78527 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRKDCP78527 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC14□□□□□ -0.17
PRKDCP78527 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRKDCP78527 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC13.99□□□□□ -0.17
PRKDCP78527 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRKDCP78527 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.99□□□□□ -0.17
PRKDCP78527 AC073648.2-201ENST00000510116 352 ntBASIC13.99□□□□□ -0.17
PRKDCP78527 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.99□□□□□ -0.17
PRKDCP78527 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
PRKDCP78527 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRKDCP78527 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRKDCP78527 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.99□□□□□ -0.17
PRKDCP78527 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRKDCP78527 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRKDCP78527 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
PRKDCP78527 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.99□□□□□ -0.17
PRKDCP78527 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRKDCP78527 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.99□□□□□ -0.17
PRKDCP78527 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRKDCP78527 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
PRKDCP78527 AL157888.1-201ENST00000631930 593 ntBASIC13.99□□□□□ -0.17
PRKDCP78527 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRKDCP78527 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
PRKDCP78527 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRKDCP78527 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRKDCP78527 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRKDCP78527 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRKDCP78527 AC036111.1-201ENST00000533973 1582 ntBASIC13.99□□□□□ -0.17
PRKDCP78527 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.99□□□□□ -0.17
PRKDCP78527 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRKDCP78527 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRKDCP78527 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRKDCP78527 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.99□□□□□ -0.17
PRKDCP78527 CYMP-203ENST00000474680 1263 ntBASIC13.99□□□□□ -0.17
PRKDCP78527 AC091607.1-201ENST00000490318 1060 ntBASIC13.99□□□□□ -0.17
PRKDCP78527 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.99□□□□□ -0.17
PRKDCP78527 AC009065.1-201ENST00000564055 1225 ntBASIC13.99□□□□□ -0.17
PRKDCP78527 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.99□□□□□ -0.17
PRKDCP78527 AC074051.2-201ENST00000565115 352 ntBASIC13.99□□□□□ -0.17
PRKDCP78527 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.99□□□□□ -0.17
PRKDCP78527 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRKDCP78527 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRKDCP78527 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC13.99□□□□□ -0.17
PRKDCP78527 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRKDCP78527 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRKDCP78527 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRKDCP78527 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRKDCP78527 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRKDCP78527 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.98□□□□□ -0.17
PRKDCP78527 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.98□□□□□ -0.17
PRKDCP78527 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.98□□□□□ -0.17
PRKDCP78527 AC139887.3-201ENST00000568585 713 ntBASIC13.98□□□□□ -0.17
PRKDCP78527 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRKDCP78527 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRKDCP78527 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PRKDCP78527 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms