Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
NKX6-1P78426 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NKX6-1P78426 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NKX6-1P78426 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NKX6-1P78426 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NKX6-1P78426 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NKX6-1P78426 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NKX6-1P78426 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NKX6-1P78426 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
NKX6-1P78426 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NKX6-1P78426 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.97■□□□□ 0.31
NKX6-1P78426 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NKX6-1P78426 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NKX6-1P78426 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.97■□□□□ 0.31
NKX6-1P78426 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
NKX6-1P78426 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NKX6-1P78426 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NKX6-1P78426 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NKX6-1P78426 AP006587.1-201ENST00000534129 1502 ntBASIC16.97■□□□□ 0.31
NKX6-1P78426 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.97■□□□□ 0.31
NKX6-1P78426 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NKX6-1P78426 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
NKX6-1P78426 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
NKX6-1P78426 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.97■□□□□ 0.31
NKX6-1P78426 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NKX6-1P78426 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.97■□□□□ 0.31
NKX6-1P78426 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NKX6-1P78426 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NKX6-1P78426 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NKX6-1P78426 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NKX6-1P78426 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
NKX6-1P78426 AL020996.1-203ENST00000536896 2307 ntBASIC16.97■□□□□ 0.31
NKX6-1P78426 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NKX6-1P78426 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NKX6-1P78426 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.97■□□□□ 0.31
NKX6-1P78426 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.97■□□□□ 0.31
NKX6-1P78426 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
NKX6-1P78426 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.96■□□□□ 0.31
NKX6-1P78426 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NKX6-1P78426 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.96■□□□□ 0.31
NKX6-1P78426 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NKX6-1P78426 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NKX6-1P78426 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NKX6-1P78426 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
NKX6-1P78426 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NKX6-1P78426 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.96■□□□□ 0.31
NKX6-1P78426 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
NKX6-1P78426 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.96■□□□□ 0.31
NKX6-1P78426 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NKX6-1P78426 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NKX6-1P78426 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.96■□□□□ 0.31
NKX6-1P78426 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NKX6-1P78426 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NKX6-1P78426 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.96■□□□□ 0.31
NKX6-1P78426 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.96■□□□□ 0.31
NKX6-1P78426 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.96■□□□□ 0.31
NKX6-1P78426 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NKX6-1P78426 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.96■□□□□ 0.31
NKX6-1P78426 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.96■□□□□ 0.31
NKX6-1P78426 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NKX6-1P78426 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NKX6-1P78426 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NKX6-1P78426 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.96■□□□□ 0.31
NKX6-1P78426 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NKX6-1P78426 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NKX6-1P78426 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.96■□□□□ 0.3
NKX6-1P78426 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.96■□□□□ 0.3
NKX6-1P78426 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
NKX6-1P78426 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
NKX6-1P78426 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
NKX6-1P78426 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NKX6-1P78426 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NKX6-1P78426 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.95■□□□□ 0.3
NKX6-1P78426 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.95■□□□□ 0.3
NKX6-1P78426 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NKX6-1P78426 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NKX6-1P78426 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NKX6-1P78426 AP001271.2-201ENST00000624018 1556 ntBASIC16.95■□□□□ 0.3
NKX6-1P78426 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NKX6-1P78426 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NKX6-1P78426 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
NKX6-1P78426 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.95■□□□□ 0.3
NKX6-1P78426 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.95■□□□□ 0.3
NKX6-1P78426 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.95■□□□□ 0.3
NKX6-1P78426 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
NKX6-1P78426 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.95■□□□□ 0.3
NKX6-1P78426 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NKX6-1P78426 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.95■□□□□ 0.3
NKX6-1P78426 AC099778.1-201ENST00000568593 1911 ntBASIC16.95■□□□□ 0.3
NKX6-1P78426 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
NKX6-1P78426 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NKX6-1P78426 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.95■□□□□ 0.3
NKX6-1P78426 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NKX6-1P78426 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NKX6-1P78426 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NKX6-1P78426 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NKX6-1P78426 AC090340.1-201ENST00000620778 4980 ntBASIC16.95■□□□□ 0.3
NKX6-1P78426 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NKX6-1P78426 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NKX6-1P78426 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms