Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
AP1S2P56377 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP1S2P56377 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AP1S2P56377 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP1S2P56377 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.8■□□□□ 0.6
AP1S2P56377 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.8■□□□□ 0.6
AP1S2P56377 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.8■□□□□ 0.6
AP1S2P56377 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.8■□□□□ 0.6
AP1S2P56377 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AP1S2P56377 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP1S2P56377 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP1S2P56377 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.8■□□□□ 0.6
AP1S2P56377 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.8■□□□□ 0.6
AP1S2P56377 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.8■□□□□ 0.6
AP1S2P56377 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.8■□□□□ 0.6
AP1S2P56377 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.8■□□□□ 0.6
AP1S2P56377 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
AP1S2P56377 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
AP1S2P56377 ITM2C-210ENST00000620962 501 ntBASIC18.8■□□□□ 0.6
AP1S2P56377 HLA-A-209ENST00000638375 975 ntBASIC18.8■□□□□ 0.6
AP1S2P56377 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.8■□□□□ 0.6
AP1S2P56377 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
AP1S2P56377 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP1S2P56377 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP1S2P56377 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP1S2P56377 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.79■□□□□ 0.6
AP1S2P56377 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.79■□□□□ 0.6
AP1S2P56377 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
AP1S2P56377 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP1S2P56377 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
AP1S2P56377 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.79■□□□□ 0.6
AP1S2P56377 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP1S2P56377 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP1S2P56377 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP1S2P56377 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AP1S2P56377 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.79■□□□□ 0.6
AP1S2P56377 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
AP1S2P56377 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP1S2P56377 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
AP1S2P56377 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AP1S2P56377 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.79■□□□□ 0.6
AP1S2P56377 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AP1S2P56377 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
AP1S2P56377 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.79■□□□□ 0.6
AP1S2P56377 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.79■□□□□ 0.6
AP1S2P56377 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.79■□□□□ 0.6
AP1S2P56377 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.79■□□□□ 0.6
AP1S2P56377 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.79■□□□□ 0.6
AP1S2P56377 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
AP1S2P56377 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.79■□□□□ 0.6
AP1S2P56377 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP1S2P56377 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
AP1S2P56377 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
AP1S2P56377 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.79■□□□□ 0.6
AP1S2P56377 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
AP1S2P56377 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AP1S2P56377 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.79■□□□□ 0.6
AP1S2P56377 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP1S2P56377 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP1S2P56377 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
AP1S2P56377 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP1S2P56377 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP1S2P56377 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP1S2P56377 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP1S2P56377 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP1S2P56377 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
AP1S2P56377 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP1S2P56377 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.78■□□□□ 0.6
AP1S2P56377 C1QBPP2-201ENST00000528754 825 ntBASIC18.78■□□□□ 0.6
AP1S2P56377 AL160286.2-201ENST00000567150 934 ntBASIC18.78■□□□□ 0.6
AP1S2P56377 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.78■□□□□ 0.6
AP1S2P56377 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.78■□□□□ 0.6
AP1S2P56377 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP1S2P56377 TEX21P-204ENST00000641479 1693 ntBASIC18.78■□□□□ 0.6
AP1S2P56377 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP1S2P56377 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP1S2P56377 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP1S2P56377 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
AP1S2P56377 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP1S2P56377 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.77■□□□□ 0.6
AP1S2P56377 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP1S2P56377 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP1S2P56377 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
AP1S2P56377 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
AP1S2P56377 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP1S2P56377 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP1S2P56377 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP1S2P56377 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.77■□□□□ 0.6
AP1S2P56377 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.77■□□□□ 0.6
AP1S2P56377 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.77■□□□□ 0.6
AP1S2P56377 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
AP1S2P56377 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
AP1S2P56377 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
AP1S2P56377 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.77■□□□□ 0.59
AP1S2P56377 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
AP1S2P56377 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
AP1S2P56377 AC018445.3-201ENST00000624177 1945 ntBASIC18.76■□□□□ 0.59
AP1S2P56377 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AP1S2P56377 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
AP1S2P56377 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms