Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.67■□□□□ 0.42
CDH11P55287 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH11P55287 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.67■□□□□ 0.42
CDH11P55287 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH11P55287 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH11P55287 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH11P55287 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDH11P55287 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.66■□□□□ 0.42
CDH11P55287 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDH11P55287 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH11P55287 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDH11P55287 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH11P55287 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.66■□□□□ 0.42
CDH11P55287 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CDH11P55287 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.66■□□□□ 0.42
CDH11P55287 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CDH11P55287 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.66■□□□□ 0.42
CDH11P55287 AC026366.1-201ENST00000488803 879 ntBASIC17.66■□□□□ 0.42
CDH11P55287 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH11P55287 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDH11P55287 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDH11P55287 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CDH11P55287 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH11P55287 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CDH11P55287 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH11P55287 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH11P55287 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH11P55287 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH11P55287 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.66■□□□□ 0.42
CDH11P55287 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH11P55287 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CDH11P55287 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH11P55287 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.65■□□□□ 0.42
CDH11P55287 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CDH11P55287 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH11P55287 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH11P55287 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH11P55287 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH11P55287 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH11P55287 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CDH11P55287 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.65■□□□□ 0.42
CDH11P55287 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.65■□□□□ 0.42
CDH11P55287 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH11P55287 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH11P55287 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH11P55287 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH11P55287 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH11P55287 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH11P55287 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH11P55287 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CDH11P55287 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH11P55287 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH11P55287 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH11P55287 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH11P55287 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH11P55287 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH11P55287 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH11P55287 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.65■□□□□ 0.42
CDH11P55287 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CDH11P55287 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH11P55287 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
CDH11P55287 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CDH11P55287 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH11P55287 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CDH11P55287 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH11P55287 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH11P55287 AL138781.2-201ENST00000617896 1843 ntBASIC17.64■□□□□ 0.41
CDH11P55287 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH11P55287 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH11P55287 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.64■□□□□ 0.41
CDH11P55287 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.64■□□□□ 0.41
CDH11P55287 AC090340.1-201ENST00000620778 4980 ntBASIC17.64■□□□□ 0.41
CDH11P55287 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CDH11P55287 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH11P55287 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH11P55287 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH11P55287 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.64■□□□□ 0.41
CDH11P55287 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.64■□□□□ 0.41
CDH11P55287 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH11P55287 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH11P55287 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH11P55287 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH11P55287 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDH11P55287 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH11P55287 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH11P55287 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH11P55287 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.63■□□□□ 0.41
CDH11P55287 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH11P55287 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CDH11P55287 AC092368.3-202ENST00000574180 1591 ntBASIC17.63■□□□□ 0.41
CDH11P55287 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
CDH11P55287 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH11P55287 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH11P55287 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH11P55287 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH11P55287 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH11P55287 AC128676.1-201ENST00000454392 318 ntBASIC17.63■□□□□ 0.41
CDH11P55287 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH11P55287 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH11P55287 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms