Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH8P55286 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH8P55286 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CDH8P55286 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.63■□□□□ 0.89
CDH8P55286 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH8P55286 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH8P55286 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH8P55286 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.62■□□□□ 0.89
CDH8P55286 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.62■□□□□ 0.89
CDH8P55286 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH8P55286 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
CDH8P55286 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CDH8P55286 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CDH8P55286 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH8P55286 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.62■□□□□ 0.89
CDH8P55286 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CDH8P55286 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.62■□□□□ 0.89
CDH8P55286 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.62■□□□□ 0.89
CDH8P55286 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.62■□□□□ 0.89
CDH8P55286 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.62■□□□□ 0.89
CDH8P55286 MIR4785-201ENST00000585005 73 ntBASIC20.62■□□□□ 0.89
CDH8P55286 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.62■□□□□ 0.89
CDH8P55286 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CDH8P55286 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CDH8P55286 AC116562.4-201ENST00000641316 2276 ntBASIC20.62■□□□□ 0.89
CDH8P55286 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDH8P55286 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CDH8P55286 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH8P55286 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH8P55286 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CDH8P55286 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH8P55286 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.61■□□□□ 0.89
CDH8P55286 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH8P55286 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH8P55286 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CDH8P55286 RCC2P6-201ENST00000526625 1557 ntBASIC20.61■□□□□ 0.89
CDH8P55286 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH8P55286 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CDH8P55286 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.61■□□□□ 0.89
CDH8P55286 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH8P55286 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.61■□□□□ 0.89
CDH8P55286 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.61■□□□□ 0.89
CDH8P55286 B3GAT3P1-201ENST00000471720 806 ntBASIC20.61■□□□□ 0.89
CDH8P55286 AC116562.2-201ENST00000507042 360 ntBASIC20.61■□□□□ 0.89
CDH8P55286 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.61■□□□□ 0.89
CDH8P55286 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.61■□□□□ 0.89
CDH8P55286 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH8P55286 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.61■□□□□ 0.89
CDH8P55286 AL355075.4-201ENST00000554988 638 ntBASIC20.61■□□□□ 0.89
CDH8P55286 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH8P55286 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.61■□□□□ 0.89
CDH8P55286 MIR6786-201ENST00000616843 113 ntBASIC20.61■□□□□ 0.89
CDH8P55286 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.61■□□□□ 0.89
CDH8P55286 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH8P55286 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CDH8P55286 KRT8P41-201ENST00000533985 1514 ntBASIC20.61■□□□□ 0.89
CDH8P55286 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH8P55286 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH8P55286 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH8P55286 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.61■□□□□ 0.89
CDH8P55286 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH8P55286 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CDH8P55286 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.61■□□□□ 0.89
CDH8P55286 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CDH8P55286 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.61■□□□□ 0.89
CDH8P55286 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.61■□□□□ 0.89
CDH8P55286 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH8P55286 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH8P55286 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.6■□□□□ 0.89
CDH8P55286 KRT17P2-201ENST00000300992 1314 ntBASIC20.6■□□□□ 0.89
CDH8P55286 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH8P55286 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDH8P55286 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.6■□□□□ 0.89
CDH8P55286 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.6■□□□□ 0.89
CDH8P55286 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
CDH8P55286 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.6■□□□□ 0.89
CDH8P55286 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.6■□□□□ 0.89
CDH8P55286 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.6■□□□□ 0.89
CDH8P55286 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.6■□□□□ 0.89
CDH8P55286 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH8P55286 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH8P55286 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH8P55286 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.6■□□□□ 0.89
CDH8P55286 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.6■□□□□ 0.89
CDH8P55286 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.6■□□□□ 0.89
CDH8P55286 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH8P55286 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDH8P55286 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH8P55286 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDH8P55286 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH8P55286 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CDH8P55286 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH8P55286 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH8P55286 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH8P55286 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH8P55286 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH8P55286 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH8P55286 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH8P55286 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CDH8P55286 AC091390.4-202ENST00000476426 537 ntBASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms