Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGA2P52926 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HMGA2P52926 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
HMGA2P52926 YBX1P10-201ENST00000444752 975 ntBASIC17.63■□□□□ 0.41
HMGA2P52926 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HMGA2P52926 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HMGA2P52926 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGA2P52926 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGA2P52926 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGA2P52926 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.63■□□□□ 0.41
HMGA2P52926 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.63■□□□□ 0.41
HMGA2P52926 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGA2P52926 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGA2P52926 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGA2P52926 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HMGA2P52926 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGA2P52926 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGA2P52926 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGA2P52926 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGA2P52926 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HMGA2P52926 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGA2P52926 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGA2P52926 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HMGA2P52926 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGA2P52926 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.62■□□□□ 0.41
HMGA2P52926 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGA2P52926 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.62■□□□□ 0.41
HMGA2P52926 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.62■□□□□ 0.41
HMGA2P52926 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGA2P52926 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HMGA2P52926 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGA2P52926 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HMGA2P52926 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
HMGA2P52926 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HMGA2P52926 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.62■□□□□ 0.41
HMGA2P52926 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGA2P52926 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGA2P52926 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGA2P52926 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGA2P52926 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
HMGA2P52926 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGA2P52926 MKRN4P-201ENST00000444706 1521 ntBASIC17.62■□□□□ 0.41
HMGA2P52926 AP006587.1-201ENST00000534129 1502 ntBASIC17.62■□□□□ 0.41
HMGA2P52926 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGA2P52926 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGA2P52926 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HMGA2P52926 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
HMGA2P52926 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HMGA2P52926 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGA2P52926 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGA2P52926 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGA2P52926 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HMGA2P52926 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGA2P52926 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.61■□□□□ 0.41
HMGA2P52926 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.61■□□□□ 0.41
HMGA2P52926 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGA2P52926 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGA2P52926 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.61■□□□□ 0.41
HMGA2P52926 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGA2P52926 RPS2P52-201ENST00000469610 820 ntBASIC17.61■□□□□ 0.41
HMGA2P52926 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGA2P52926 RAP2CP1-201ENST00000605103 478 ntBASIC17.61■□□□□ 0.41
HMGA2P52926 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGA2P52926 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGA2P52926 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGA2P52926 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGA2P52926 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HMGA2P52926 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.61■□□□□ 0.41
HMGA2P52926 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.61■□□□□ 0.41
HMGA2P52926 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGA2P52926 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGA2P52926 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGA2P52926 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGA2P52926 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HMGA2P52926 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HMGA2P52926 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.61■□□□□ 0.41
HMGA2P52926 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGA2P52926 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.6■□□□□ 0.41
HMGA2P52926 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.6■□□□□ 0.41
HMGA2P52926 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGA2P52926 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.6■□□□□ 0.41
HMGA2P52926 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGA2P52926 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.6■□□□□ 0.41
HMGA2P52926 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.6■□□□□ 0.41
HMGA2P52926 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGA2P52926 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.6■□□□□ 0.41
HMGA2P52926 AC004911.1-201ENST00000416316 871 ntBASIC17.6■□□□□ 0.41
HMGA2P52926 AC026271.2-201ENST00000428091 497 ntBASIC17.6■□□□□ 0.41
HMGA2P52926 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.6■□□□□ 0.41
HMGA2P52926 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.6■□□□□ 0.41
HMGA2P52926 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.6■□□□□ 0.41
HMGA2P52926 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.6■□□□□ 0.41
HMGA2P52926 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGA2P52926 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGA2P52926 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGA2P52926 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGA2P52926 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGA2P52926 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.6■□□□□ 0.41
HMGA2P52926 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HMGA2P52926 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms