Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLCNKAP51800 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCNKAP51800 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLCNKAP51800 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCNKAP51800 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.95■□□□□ 0.62
CLCNKAP51800 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCNKAP51800 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCNKAP51800 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCNKAP51800 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCNKAP51800 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.95■□□□□ 0.62
CLCNKAP51800 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLCNKAP51800 AC004951.3-201ENST00000418645 1148 ntBASIC18.95■□□□□ 0.62
CLCNKAP51800 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCNKAP51800 AP005242.2-201ENST00000580065 1175 ntBASIC18.95■□□□□ 0.62
CLCNKAP51800 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.95■□□□□ 0.62
CLCNKAP51800 AP000692.2-201ENST00000608391 879 ntBASIC18.95■□□□□ 0.62
CLCNKAP51800 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.95■□□□□ 0.62
CLCNKAP51800 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.95■□□□□ 0.62
CLCNKAP51800 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCNKAP51800 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCNKAP51800 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CLCNKAP51800 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCNKAP51800 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CLCNKAP51800 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.95■□□□□ 0.62
CLCNKAP51800 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.95■□□□□ 0.62
CLCNKAP51800 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.95■□□□□ 0.62
CLCNKAP51800 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLCNKAP51800 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CLCNKAP51800 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.94■□□□□ 0.62
CLCNKAP51800 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLCNKAP51800 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
CLCNKAP51800 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLCNKAP51800 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLCNKAP51800 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCNKAP51800 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.94■□□□□ 0.62
CLCNKAP51800 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCNKAP51800 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCNKAP51800 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.94■□□□□ 0.62
CLCNKAP51800 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCNKAP51800 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCNKAP51800 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCNKAP51800 AC211429.1-201ENST00000415277 523 ntBASIC18.94■□□□□ 0.62
CLCNKAP51800 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLCNKAP51800 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.94■□□□□ 0.62
CLCNKAP51800 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.94■□□□□ 0.62
CLCNKAP51800 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.94■□□□□ 0.62
CLCNKAP51800 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CLCNKAP51800 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCNKAP51800 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.94■□□□□ 0.62
CLCNKAP51800 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.94■□□□□ 0.62
CLCNKAP51800 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CLCNKAP51800 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCNKAP51800 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.94■□□□□ 0.62
CLCNKAP51800 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CLCNKAP51800 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CLCNKAP51800 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CLCNKAP51800 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.93■□□□□ 0.62
CLCNKAP51800 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLCNKAP51800 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.93■□□□□ 0.62
CLCNKAP51800 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCNKAP51800 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCNKAP51800 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCNKAP51800 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.93■□□□□ 0.62
CLCNKAP51800 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.93■□□□□ 0.62
CLCNKAP51800 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCNKAP51800 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.93■□□□□ 0.62
CLCNKAP51800 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.93■□□□□ 0.62
CLCNKAP51800 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.93■□□□□ 0.62
CLCNKAP51800 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.93■□□□□ 0.62
CLCNKAP51800 LINC01023-201ENST00000606054 436 ntBASIC18.93■□□□□ 0.62
CLCNKAP51800 AP000525.1-201ENST00000608286 694 ntBASIC18.93■□□□□ 0.62
CLCNKAP51800 AC012306.2-201ENST00000609350 630 ntBASIC18.93■□□□□ 0.62
CLCNKAP51800 AC097493.4-201ENST00000641197 219 ntBASIC18.93■□□□□ 0.62
CLCNKAP51800 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCNKAP51800 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CLCNKAP51800 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCNKAP51800 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCNKAP51800 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCNKAP51800 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCNKAP51800 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCNKAP51800 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCNKAP51800 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCNKAP51800 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CLCNKAP51800 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.92■□□□□ 0.62
CLCNKAP51800 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCNKAP51800 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCNKAP51800 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCNKAP51800 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCNKAP51800 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCNKAP51800 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCNKAP51800 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCNKAP51800 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.92■□□□□ 0.62
CLCNKAP51800 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.92■□□□□ 0.62
CLCNKAP51800 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.92■□□□□ 0.62
CLCNKAP51800 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCNKAP51800 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.92■□□□□ 0.62
CLCNKAP51800 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.92■□□□□ 0.62
CLCNKAP51800 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.92■□□□□ 0.62
CLCNKAP51800 AC011298.2-201ENST00000617989 482 ntBASIC18.92■□□□□ 0.62
CLCNKAP51800 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms