Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TUBP50607 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.33■□□□□ 0.85
TUBP50607 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.33■□□□□ 0.84
TUBP50607 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TUBP50607 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
TUBP50607 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
TUBP50607 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.33■□□□□ 0.84
TUBP50607 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TUBP50607 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TUBP50607 AC079598.2-202ENST00000546624 1451 ntBASIC20.32■□□□□ 0.84
TUBP50607 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TUBP50607 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TUBP50607 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TUBP50607 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TUBP50607 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TUBP50607 MMP23A-201ENST00000234610 1017 ntBASIC20.32■□□□□ 0.84
TUBP50607 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TUBP50607 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TUBP50607 MESTP1-201ENST00000404287 994 ntBASIC20.32■□□□□ 0.84
TUBP50607 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TUBP50607 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TUBP50607 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TUBP50607 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.32■□□□□ 0.84
TUBP50607 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.32■□□□□ 0.84
TUBP50607 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.32■□□□□ 0.84
TUBP50607 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.32■□□□□ 0.84
TUBP50607 DGCR10-201ENST00000609839 495 ntBASIC20.32■□□□□ 0.84
TUBP50607 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.32■□□□□ 0.84
TUBP50607 AC097493.4-201ENST00000641197 219 ntBASIC20.32■□□□□ 0.84
TUBP50607 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TUBP50607 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TUBP50607 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TUBP50607 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TUBP50607 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.31■□□□□ 0.84
TUBP50607 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TUBP50607 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TUBP50607 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBP50607 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.31■□□□□ 0.84
TUBP50607 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBP50607 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBP50607 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBP50607 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TUBP50607 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.31■□□□□ 0.84
TUBP50607 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBP50607 B3GAT3P1-201ENST00000471720 806 ntBASIC20.31■□□□□ 0.84
TUBP50607 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TUBP50607 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.31■□□□□ 0.84
TUBP50607 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TUBP50607 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.31■□□□□ 0.84
TUBP50607 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.31■□□□□ 0.84
TUBP50607 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.31■□□□□ 0.84
TUBP50607 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.31■□□□□ 0.84
TUBP50607 AC012306.2-201ENST00000609350 630 ntBASIC20.31■□□□□ 0.84
TUBP50607 MIR6786-201ENST00000616843 113 ntBASIC20.31■□□□□ 0.84
TUBP50607 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TUBP50607 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.31■□□□□ 0.84
TUBP50607 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.31■□□□□ 0.84
TUBP50607 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBP50607 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBP50607 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.31■□□□□ 0.84
TUBP50607 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TUBP50607 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TUBP50607 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TUBP50607 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TUBP50607 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TUBP50607 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TUBP50607 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TUBP50607 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TUBP50607 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TUBP50607 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TUBP50607 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.3■□□□□ 0.84
TUBP50607 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.3■□□□□ 0.84
TUBP50607 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.3■□□□□ 0.84
TUBP50607 FITM1-202ENST00000559294 800 ntBASIC20.3■□□□□ 0.84
TUBP50607 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.3■□□□□ 0.84
TUBP50607 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.3■□□□□ 0.84
TUBP50607 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.3■□□□□ 0.84
TUBP50607 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.3■□□□□ 0.84
TUBP50607 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TUBP50607 AP000525.1-201ENST00000608286 694 ntBASIC20.3■□□□□ 0.84
TUBP50607 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.3■□□□□ 0.84
TUBP50607 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.3■□□□□ 0.84
TUBP50607 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TUBP50607 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TUBP50607 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TUBP50607 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
TUBP50607 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TUBP50607 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TUBP50607 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TUBP50607 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TUBP50607 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TUBP50607 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.29■□□□□ 0.84
TUBP50607 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TUBP50607 ECEL1P3-201ENST00000427961 737 ntBASIC20.29■□□□□ 0.84
TUBP50607 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TUBP50607 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TUBP50607 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.29■□□□□ 0.84
TUBP50607 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TUBP50607 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TUBP50607 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms