Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1A1P48729 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1A1P48729 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1A1P48729 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.18■□□□□ 0.34
CSNK1A1P48729 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1A1P48729 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.18■□□□□ 0.34
CSNK1A1P48729 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1A1P48729 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.18■□□□□ 0.34
CSNK1A1P48729 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CSNK1A1P48729 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.18■□□□□ 0.34
CSNK1A1P48729 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.18■□□□□ 0.34
CSNK1A1P48729 C1QL1P1-201ENST00000568105 661 ntBASIC17.18■□□□□ 0.34
CSNK1A1P48729 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1A1P48729 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1A1P48729 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1A1P48729 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1A1P48729 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CSNK1A1P48729 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1A1P48729 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.18■□□□□ 0.34
CSNK1A1P48729 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSNK1A1P48729 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSNK1A1P48729 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.17■□□□□ 0.34
CSNK1A1P48729 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CSNK1A1P48729 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CSNK1A1P48729 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.17■□□□□ 0.34
CSNK1A1P48729 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSNK1A1P48729 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CSNK1A1P48729 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSNK1A1P48729 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSNK1A1P48729 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
CSNK1A1P48729 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.17■□□□□ 0.34
CSNK1A1P48729 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CSNK1A1P48729 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.17■□□□□ 0.34
CSNK1A1P48729 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSNK1A1P48729 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSNK1A1P48729 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.17■□□□□ 0.34
CSNK1A1P48729 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.17■□□□□ 0.34
CSNK1A1P48729 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.17■□□□□ 0.34
CSNK1A1P48729 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSNK1A1P48729 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.17■□□□□ 0.34
CSNK1A1P48729 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CSNK1A1P48729 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.16■□□□□ 0.34
CSNK1A1P48729 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1A1P48729 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.16■□□□□ 0.34
CSNK1A1P48729 AL032819.2-201ENST00000624543 2162 ntBASIC17.16■□□□□ 0.34
CSNK1A1P48729 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1A1P48729 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
CSNK1A1P48729 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.16■□□□□ 0.34
CSNK1A1P48729 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1A1P48729 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.16■□□□□ 0.34
CSNK1A1P48729 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1A1P48729 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1A1P48729 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1A1P48729 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1A1P48729 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1A1P48729 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CSNK1A1P48729 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1A1P48729 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.16■□□□□ 0.34
CSNK1A1P48729 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CSNK1A1P48729 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.16■□□□□ 0.34
CSNK1A1P48729 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.16■□□□□ 0.34
CSNK1A1P48729 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1A1P48729 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.16■□□□□ 0.34
CSNK1A1P48729 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.16■□□□□ 0.34
CSNK1A1P48729 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1A1P48729 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.16■□□□□ 0.34
CSNK1A1P48729 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1A1P48729 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1A1P48729 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1A1P48729 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CSNK1A1P48729 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CSNK1A1P48729 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.15■□□□□ 0.34
CSNK1A1P48729 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.15■□□□□ 0.34
CSNK1A1P48729 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.15■□□□□ 0.34
CSNK1A1P48729 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSNK1A1P48729 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSNK1A1P48729 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSNK1A1P48729 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CSNK1A1P48729 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CSNK1A1P48729 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.15■□□□□ 0.34
CSNK1A1P48729 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CSNK1A1P48729 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.15■□□□□ 0.34
CSNK1A1P48729 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CSNK1A1P48729 RPPH1-201ENST00000516869 333 ntBASIC17.15■□□□□ 0.34
CSNK1A1P48729 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.15■□□□□ 0.34
CSNK1A1P48729 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.15■□□□□ 0.34
CSNK1A1P48729 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.15■□□□□ 0.34
CSNK1A1P48729 FAM197Y4-202ENST00000622692 608 ntBASIC17.15■□□□□ 0.34
CSNK1A1P48729 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSNK1A1P48729 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.15■□□□□ 0.34
CSNK1A1P48729 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSNK1A1P48729 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CSNK1A1P48729 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CSNK1A1P48729 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CSNK1A1P48729 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.15■□□□□ 0.34
CSNK1A1P48729 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSNK1A1P48729 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.15■□□□□ 0.34
CSNK1A1P48729 AC104417.2-201ENST00000562989 1793 ntBASIC17.15■□□□□ 0.34
CSNK1A1P48729 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSNK1A1P48729 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms