Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
KRT6CP48668 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
KRT6CP48668 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
KRT6CP48668 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6CP48668 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6CP48668 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6CP48668 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.7■□□□□ 0.58
KRT6CP48668 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
KRT6CP48668 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
KRT6CP48668 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6CP48668 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
KRT6CP48668 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6CP48668 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.7■□□□□ 0.58
KRT6CP48668 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.7■□□□□ 0.58
KRT6CP48668 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.7■□□□□ 0.58
KRT6CP48668 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6CP48668 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.7■□□□□ 0.58
KRT6CP48668 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.7■□□□□ 0.58
KRT6CP48668 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.7■□□□□ 0.58
KRT6CP48668 AC008687.6-201ENST00000596318 630 ntBASIC18.7■□□□□ 0.58
KRT6CP48668 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
KRT6CP48668 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6CP48668 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6CP48668 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.7■□□□□ 0.58
KRT6CP48668 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6CP48668 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.7■□□□□ 0.58
KRT6CP48668 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
KRT6CP48668 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6CP48668 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6CP48668 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6CP48668 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6CP48668 AC141586.3-201ENST00000562166 1838 ntBASIC18.7■□□□□ 0.58
KRT6CP48668 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6CP48668 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT6CP48668 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT6CP48668 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT6CP48668 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRT6CP48668 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT6CP48668 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
KRT6CP48668 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.69■□□□□ 0.58
KRT6CP48668 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRT6CP48668 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT6CP48668 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.69■□□□□ 0.58
KRT6CP48668 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.69■□□□□ 0.58
KRT6CP48668 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.69■□□□□ 0.58
KRT6CP48668 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRT6CP48668 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
KRT6CP48668 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.69■□□□□ 0.58
KRT6CP48668 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.69■□□□□ 0.58
KRT6CP48668 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.69■□□□□ 0.58
KRT6CP48668 AC142086.2-201ENST00000569753 217 ntBASIC18.69■□□□□ 0.58
KRT6CP48668 AC104771.1-201ENST00000603335 964 ntBASIC18.69■□□□□ 0.58
KRT6CP48668 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT6CP48668 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRT6CP48668 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT6CP48668 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
KRT6CP48668 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
KRT6CP48668 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
KRT6CP48668 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
KRT6CP48668 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT6CP48668 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT6CP48668 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT6CP48668 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.68■□□□□ 0.58
KRT6CP48668 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT6CP48668 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT6CP48668 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT6CP48668 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.68■□□□□ 0.58
KRT6CP48668 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT6CP48668 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT6CP48668 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.68■□□□□ 0.58
KRT6CP48668 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.68■□□□□ 0.58
KRT6CP48668 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.68■□□□□ 0.58
KRT6CP48668 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.68■□□□□ 0.58
KRT6CP48668 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
KRT6CP48668 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.68■□□□□ 0.58
KRT6CP48668 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT6CP48668 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
KRT6CP48668 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT6CP48668 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.68■□□□□ 0.58
KRT6CP48668 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
KRT6CP48668 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT6CP48668 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT6CP48668 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
KRT6CP48668 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRT6CP48668 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRT6CP48668 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
KRT6CP48668 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT6CP48668 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT6CP48668 TEX21P-204ENST00000641479 1693 ntBASIC18.67■□□□□ 0.58
KRT6CP48668 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.67■□□□□ 0.58
KRT6CP48668 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRT6CP48668 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT6CP48668 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
KRT6CP48668 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.67■□□□□ 0.58
KRT6CP48668 TUBB8P6-201ENST00000436895 1288 ntBASIC18.67■□□□□ 0.58
KRT6CP48668 KRT18P16-201ENST00000510337 1294 ntBASIC18.67■□□□□ 0.58
KRT6CP48668 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.67■□□□□ 0.58
KRT6CP48668 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRT6CP48668 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRT6CP48668 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms