Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN9P43378 Z85996.1-201ENST00000494644 937 ntBASIC20.09■□□□□ 0.81
PTPN9P43378 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN9P43378 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.09■□□□□ 0.81
PTPN9P43378 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.09■□□□□ 0.81
PTPN9P43378 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.09■□□□□ 0.81
PTPN9P43378 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PTPN9P43378 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN9P43378 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PTPN9P43378 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PTPN9P43378 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
PTPN9P43378 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PTPN9P43378 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN9P43378 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN9P43378 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN9P43378 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN9P43378 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PTPN9P43378 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PTPN9P43378 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.08■□□□□ 0.81
PTPN9P43378 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN9P43378 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN9P43378 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN9P43378 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN9P43378 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
PTPN9P43378 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN9P43378 AC004980.1-204ENST00000429707 299 ntBASIC20.08■□□□□ 0.81
PTPN9P43378 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.08■□□□□ 0.81
PTPN9P43378 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PTPN9P43378 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.08■□□□□ 0.81
PTPN9P43378 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.08■□□□□ 0.81
PTPN9P43378 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN9P43378 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.08■□□□□ 0.81
PTPN9P43378 AC073195.1-201ENST00000607241 877 ntBASIC20.08■□□□□ 0.81
PTPN9P43378 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PTPN9P43378 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTPN9P43378 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTPN9P43378 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTPN9P43378 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTPN9P43378 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTPN9P43378 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN9P43378 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PTPN9P43378 KRT8P41-201ENST00000533985 1514 ntBASIC20.07■□□□□ 0.8
PTPN9P43378 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN9P43378 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN9P43378 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN9P43378 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN9P43378 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN9P43378 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PTPN9P43378 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN9P43378 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN9P43378 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PTPN9P43378 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PTPN9P43378 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN9P43378 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.07■□□□□ 0.8
PTPN9P43378 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.07■□□□□ 0.8
PTPN9P43378 AC131212.4-201ENST00000623606 975 ntBASIC20.07■□□□□ 0.8
PTPN9P43378 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.07■□□□□ 0.8
PTPN9P43378 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN9P43378 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN9P43378 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN9P43378 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN9P43378 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN9P43378 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
PTPN9P43378 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.07■□□□□ 0.8
PTPN9P43378 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN9P43378 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN9P43378 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPN9P43378 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN9P43378 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPN9P43378 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PTPN9P43378 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN9P43378 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN9P43378 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN9P43378 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN9P43378 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PTPN9P43378 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN9P43378 KRT16P1-201ENST00000399124 1418 ntBASIC20.06■□□□□ 0.8
PTPN9P43378 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPN9P43378 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.06■□□□□ 0.8
PTPN9P43378 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPN9P43378 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPN9P43378 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPN9P43378 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.06■□□□□ 0.8
PTPN9P43378 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.06■□□□□ 0.8
PTPN9P43378 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPN9P43378 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN9P43378 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN9P43378 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN9P43378 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PTPN9P43378 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN9P43378 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN9P43378 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PTPN9P43378 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN9P43378 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN9P43378 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN9P43378 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN9P43378 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.05■□□□□ 0.8
PTPN9P43378 TSPY21P-201ENST00000433481 731 ntBASIC20.05■□□□□ 0.8
PTPN9P43378 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPN9P43378 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms