Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDNFP39905 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.79■□□□□ 0.28
GDNFP39905 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDNFP39905 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDNFP39905 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GDNFP39905 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
GDNFP39905 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDNFP39905 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDNFP39905 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
GDNFP39905 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.79■□□□□ 0.28
GDNFP39905 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDNFP39905 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDNFP39905 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.79■□□□□ 0.28
GDNFP39905 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.79■□□□□ 0.28
GDNFP39905 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDNFP39905 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.79■□□□□ 0.28
GDNFP39905 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDNFP39905 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDNFP39905 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.79■□□□□ 0.28
GDNFP39905 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDNFP39905 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.79■□□□□ 0.28
GDNFP39905 AC231657.2-201ENST00000624556 255 ntBASIC16.79■□□□□ 0.28
GDNFP39905 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.79■□□□□ 0.28
GDNFP39905 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDNFP39905 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.79■□□□□ 0.28
GDNFP39905 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDNFP39905 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
GDNFP39905 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.79■□□□□ 0.28
GDNFP39905 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
GDNFP39905 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDNFP39905 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDNFP39905 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDNFP39905 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDNFP39905 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDNFP39905 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDNFP39905 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GDNFP39905 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDNFP39905 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.78■□□□□ 0.28
GDNFP39905 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDNFP39905 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDNFP39905 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GDNFP39905 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDNFP39905 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GDNFP39905 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
GDNFP39905 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.78■□□□□ 0.28
GDNFP39905 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GDNFP39905 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
GDNFP39905 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDNFP39905 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
GDNFP39905 RARRES2P4-201ENST00000514074 484 ntBASIC16.78■□□□□ 0.28
GDNFP39905 AL162412.1-201ENST00000567129 965 ntBASIC16.78■□□□□ 0.28
GDNFP39905 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDNFP39905 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
GDNFP39905 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDNFP39905 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDNFP39905 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.78■□□□□ 0.28
GDNFP39905 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
GDNFP39905 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDNFP39905 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GDNFP39905 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDNFP39905 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GDNFP39905 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDNFP39905 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.78■□□□□ 0.28
GDNFP39905 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDNFP39905 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDNFP39905 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDNFP39905 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDNFP39905 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDNFP39905 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GDNFP39905 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GDNFP39905 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.77■□□□□ 0.28
GDNFP39905 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.77■□□□□ 0.28
GDNFP39905 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GDNFP39905 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
GDNFP39905 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.77■□□□□ 0.28
GDNFP39905 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
GDNFP39905 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
GDNFP39905 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GDNFP39905 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GDNFP39905 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
GDNFP39905 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GDNFP39905 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GDNFP39905 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
GDNFP39905 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GDNFP39905 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.77■□□□□ 0.28
GDNFP39905 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GDNFP39905 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
GDNFP39905 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GDNFP39905 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GDNFP39905 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GDNFP39905 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.77■□□□□ 0.28
GDNFP39905 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.77■□□□□ 0.28
GDNFP39905 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.77■□□□□ 0.28
GDNFP39905 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.77■□□□□ 0.28
GDNFP39905 RAP2CP1-201ENST00000605103 478 ntBASIC16.77■□□□□ 0.28
GDNFP39905 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
GDNFP39905 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
GDNFP39905 CYP21A1P-202ENST00000354927 1481 ntBASIC16.77■□□□□ 0.28
GDNFP39905 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.77■□□□□ 0.28
GDNFP39905 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms