Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PDE6BP35913 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PDE6BP35913 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.83■■□□□ 1.4
PDE6BP35913 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PDE6BP35913 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PDE6BP35913 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PDE6BP35913 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PDE6BP35913 TSSC2-201ENST00000450217 709 ntBASIC23.82■■□□□ 1.4
PDE6BP35913 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC23.82■■□□□ 1.4
PDE6BP35913 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC23.82■■□□□ 1.4
PDE6BP35913 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
PDE6BP35913 AC111152.3-201ENST00000569699 673 ntBASIC23.82■■□□□ 1.4
PDE6BP35913 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PDE6BP35913 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC23.82■■□□□ 1.4
PDE6BP35913 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PDE6BP35913 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PDE6BP35913 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC23.82■■□□□ 1.4
PDE6BP35913 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.82■■□□□ 1.4
PDE6BP35913 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
PDE6BP35913 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
PDE6BP35913 ANKRD18DP-204ENST00000455355 1975 ntBASIC23.82■■□□□ 1.4
PDE6BP35913 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
PDE6BP35913 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDE6BP35913 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PDE6BP35913 TBC1D3P2-202ENST00000577902 1649 ntBASIC23.81■■□□□ 1.4
PDE6BP35913 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDE6BP35913 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDE6BP35913 AC004870.1-201ENST00000315132 882 ntBASIC23.81■■□□□ 1.4
PDE6BP35913 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PDE6BP35913 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC23.81■■□□□ 1.4
PDE6BP35913 AC092597.1-201ENST00000487352 616 ntBASIC23.81■■□□□ 1.4
PDE6BP35913 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC23.81■■□□□ 1.4
PDE6BP35913 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC23.81■■□□□ 1.4
PDE6BP35913 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC23.81■■□□□ 1.4
PDE6BP35913 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PDE6BP35913 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDE6BP35913 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.81■■□□□ 1.4
PDE6BP35913 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDE6BP35913 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDE6BP35913 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PDE6BP35913 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
PDE6BP35913 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDE6BP35913 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDE6BP35913 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDE6BP35913 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
PDE6BP35913 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDE6BP35913 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDE6BP35913 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDE6BP35913 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDE6BP35913 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDE6BP35913 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDE6BP35913 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PDE6BP35913 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
PDE6BP35913 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC23.8■■□□□ 1.4
PDE6BP35913 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC23.8■■□□□ 1.4
PDE6BP35913 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC23.8■■□□□ 1.4
PDE6BP35913 BX276092.5-203ENST00000456199 560 ntBASIC23.8■■□□□ 1.4
PDE6BP35913 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC23.8■■□□□ 1.4
PDE6BP35913 AC011498.5-201ENST00000592027 486 ntBASIC23.8■■□□□ 1.4
PDE6BP35913 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDE6BP35913 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC23.8■■□□□ 1.4
PDE6BP35913 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDE6BP35913 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDE6BP35913 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
PDE6BP35913 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
PDE6BP35913 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDE6BP35913 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
PDE6BP35913 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC23.79■■□□□ 1.4
PDE6BP35913 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC23.79■■□□□ 1.4
PDE6BP35913 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
PDE6BP35913 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.79■■□□□ 1.4
PDE6BP35913 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PDE6BP35913 AL845331.1-201ENST00000424978 1190 ntBASIC23.79■■□□□ 1.4
PDE6BP35913 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC23.79■■□□□ 1.4
PDE6BP35913 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDE6BP35913 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDE6BP35913 AL121672.3-201ENST00000608644 468 ntBASIC23.79■■□□□ 1.4
PDE6BP35913 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PDE6BP35913 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PDE6BP35913 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PDE6BP35913 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.78■■□□□ 1.4
PDE6BP35913 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDE6BP35913 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
PDE6BP35913 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
PDE6BP35913 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
PDE6BP35913 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC23.78■■□□□ 1.4
PDE6BP35913 FAAHP1-202ENST00000446499 1238 ntBASIC23.78■■□□□ 1.4
PDE6BP35913 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PDE6BP35913 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDE6BP35913 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PDE6BP35913 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDE6BP35913 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC23.78■■□□□ 1.4
PDE6BP35913 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PDE6BP35913 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDE6BP35913 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDE6BP35913 AC016734.2-201ENST00000624325 1377 ntBASIC23.78■■□□□ 1.4
PDE6BP35913 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDE6BP35913 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.77■■□□□ 1.4
PDE6BP35913 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PDE6BP35913 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms