Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RORAP35398 AC005521.1-201ENST00000393351 872 ntBASIC18.35■□□□□ 0.53
RORAP35398 CRYGFP-201ENST00000418459 633 ntBASIC18.35■□□□□ 0.53
RORAP35398 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RORAP35398 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.35■□□□□ 0.53
RORAP35398 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.35■□□□□ 0.53
RORAP35398 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.35■□□□□ 0.53
RORAP35398 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.35■□□□□ 0.53
RORAP35398 C2orf69P3-201ENST00000565542 1120 ntBASIC18.35■□□□□ 0.53
RORAP35398 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RORAP35398 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RORAP35398 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RORAP35398 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RORAP35398 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RORAP35398 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
RORAP35398 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RORAP35398 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RORAP35398 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RORAP35398 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RORAP35398 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RORAP35398 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RORAP35398 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
RORAP35398 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RORAP35398 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RORAP35398 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RORAP35398 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.34■□□□□ 0.53
RORAP35398 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RORAP35398 TSPY14P-201ENST00000303979 915 ntBASIC18.34■□□□□ 0.53
RORAP35398 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.34■□□□□ 0.53
RORAP35398 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.34■□□□□ 0.53
RORAP35398 EGLN1P1-201ENST00000531623 762 ntBASIC18.34■□□□□ 0.53
RORAP35398 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.34■□□□□ 0.53
RORAP35398 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
RORAP35398 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RORAP35398 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RORAP35398 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RORAP35398 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RORAP35398 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.34■□□□□ 0.53
RORAP35398 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RORAP35398 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RORAP35398 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
RORAP35398 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
RORAP35398 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RORAP35398 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RORAP35398 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
RORAP35398 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RORAP35398 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RORAP35398 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RORAP35398 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RORAP35398 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.33■□□□□ 0.53
RORAP35398 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RORAP35398 AC073508.3-201ENST00000619697 1419 ntBASIC18.33■□□□□ 0.53
RORAP35398 AC096733.2-201ENST00000609937 1394 ntBASIC18.33■□□□□ 0.53
RORAP35398 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
RORAP35398 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RORAP35398 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RORAP35398 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RORAP35398 TERF1P1-201ENST00000311003 1181 ntBASIC18.33■□□□□ 0.52
RORAP35398 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.33■□□□□ 0.52
RORAP35398 SLC25A3P1-201ENST00000443844 931 ntBASIC18.33■□□□□ 0.52
RORAP35398 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.33■□□□□ 0.52
RORAP35398 AC091390.4-202ENST00000476426 537 ntBASIC18.33■□□□□ 0.52
RORAP35398 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.33■□□□□ 0.52
RORAP35398 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RORAP35398 SLC25A1P4-201ENST00000567977 778 ntBASIC18.33■□□□□ 0.52
RORAP35398 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RORAP35398 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.33■□□□□ 0.52
RORAP35398 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RORAP35398 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RORAP35398 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RORAP35398 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.33■□□□□ 0.52
RORAP35398 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RORAP35398 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RORAP35398 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.33■□□□□ 0.52
RORAP35398 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RORAP35398 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RORAP35398 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
RORAP35398 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RORAP35398 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
RORAP35398 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RORAP35398 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RORAP35398 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RORAP35398 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.32■□□□□ 0.52
RORAP35398 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RORAP35398 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.32■□□□□ 0.52
RORAP35398 FAM207BP-201ENST00000447172 505 ntBASIC18.32■□□□□ 0.52
RORAP35398 AL160286.2-201ENST00000567150 934 ntBASIC18.32■□□□□ 0.52
RORAP35398 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.32■□□□□ 0.52
RORAP35398 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RORAP35398 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.32■□□□□ 0.52
RORAP35398 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.32■□□□□ 0.52
RORAP35398 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RORAP35398 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RORAP35398 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RORAP35398 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RORAP35398 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.31■□□□□ 0.52
RORAP35398 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RORAP35398 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RORAP35398 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RORAP35398 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms