Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 KRT8P41-201ENST00000533985 1514 ntBASIC16.66■□□□□ 0.26
CD40P25942 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD40P25942 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.66■□□□□ 0.26
CD40P25942 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.66■□□□□ 0.26
CD40P25942 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.66■□□□□ 0.26
CD40P25942 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD40P25942 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD40P25942 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.66■□□□□ 0.26
CD40P25942 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD40P25942 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CD40P25942 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.66■□□□□ 0.26
CD40P25942 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.66■□□□□ 0.26
CD40P25942 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD40P25942 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.66■□□□□ 0.26
CD40P25942 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.66■□□□□ 0.26
CD40P25942 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD40P25942 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CD40P25942 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD40P25942 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD40P25942 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.66■□□□□ 0.26
CD40P25942 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.66■□□□□ 0.26
CD40P25942 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD40P25942 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD40P25942 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD40P25942 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.66■□□□□ 0.26
CD40P25942 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
CD40P25942 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD40P25942 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD40P25942 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD40P25942 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD40P25942 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD40P25942 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.65■□□□□ 0.26
CD40P25942 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD40P25942 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD40P25942 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.65■□□□□ 0.26
CD40P25942 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD40P25942 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.65■□□□□ 0.26
CD40P25942 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.65■□□□□ 0.26
CD40P25942 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.65■□□□□ 0.26
CD40P25942 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.65■□□□□ 0.26
CD40P25942 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.65■□□□□ 0.26
CD40P25942 AC128688.1-201ENST00000487626 519 ntBASIC16.65■□□□□ 0.26
CD40P25942 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD40P25942 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CD40P25942 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.65■□□□□ 0.26
CD40P25942 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD40P25942 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD40P25942 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.65■□□□□ 0.26
CD40P25942 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD40P25942 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.65■□□□□ 0.26
CD40P25942 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD40P25942 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
CD40P25942 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD40P25942 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.65■□□□□ 0.26
CD40P25942 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD40P25942 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.64■□□□□ 0.25
CD40P25942 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CD40P25942 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
CD40P25942 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CD40P25942 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD40P25942 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD40P25942 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CD40P25942 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CD40P25942 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.64■□□□□ 0.25
CD40P25942 AC113347.1-201ENST00000413321 391 ntBASIC16.64■□□□□ 0.25
CD40P25942 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD40P25942 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.64■□□□□ 0.25
CD40P25942 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.64■□□□□ 0.25
CD40P25942 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.64■□□□□ 0.25
CD40P25942 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.64■□□□□ 0.25
CD40P25942 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD40P25942 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD40P25942 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.64■□□□□ 0.25
CD40P25942 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD40P25942 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.64■□□□□ 0.25
CD40P25942 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD40P25942 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD40P25942 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CD40P25942 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD40P25942 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.64■□□□□ 0.25
CD40P25942 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.64■□□□□ 0.25
CD40P25942 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD40P25942 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CD40P25942 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.64■□□□□ 0.25
CD40P25942 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD40P25942 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD40P25942 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD40P25942 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.63■□□□□ 0.25
CD40P25942 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD40P25942 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD40P25942 ZNF815P-204ENST00000434898 1737 ntBASIC16.63■□□□□ 0.25
CD40P25942 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.63■□□□□ 0.25
CD40P25942 AC005521.1-201ENST00000393351 872 ntBASIC16.63■□□□□ 0.25
CD40P25942 SLC25A3P1-201ENST00000443844 931 ntBASIC16.63■□□□□ 0.25
CD40P25942 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.63■□□□□ 0.25
CD40P25942 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.63■□□□□ 0.25
CD40P25942 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.63■□□□□ 0.25
CD40P25942 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
CD40P25942 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.63■□□□□ 0.25
CD40P25942 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms