Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH3P22223 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH3P22223 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH3P22223 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH3P22223 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDH3P22223 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH3P22223 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH3P22223 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH3P22223 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH3P22223 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH3P22223 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH3P22223 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CDH3P22223 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
CDH3P22223 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH3P22223 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH3P22223 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH3P22223 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH3P22223 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH3P22223 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH3P22223 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH3P22223 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.88■□□□□ 0.61
CDH3P22223 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.88■□□□□ 0.61
CDH3P22223 CD177P1-201ENST00000606252 935 ntBASIC18.88■□□□□ 0.61
CDH3P22223 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH3P22223 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH3P22223 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH3P22223 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.88■□□□□ 0.61
CDH3P22223 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH3P22223 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH3P22223 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CDH3P22223 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH3P22223 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH3P22223 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH3P22223 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH3P22223 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH3P22223 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH3P22223 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CDH3P22223 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CDH3P22223 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.87■□□□□ 0.61
CDH3P22223 FAM197Y1-201ENST00000421178 764 ntBASIC18.87■□□□□ 0.61
CDH3P22223 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH3P22223 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.87■□□□□ 0.61
CDH3P22223 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH3P22223 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH3P22223 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.87■□□□□ 0.61
CDH3P22223 KRT18P16-201ENST00000510337 1294 ntBASIC18.87■□□□□ 0.61
CDH3P22223 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH3P22223 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CDH3P22223 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDH3P22223 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDH3P22223 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.87■□□□□ 0.61
CDH3P22223 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.87■□□□□ 0.61
CDH3P22223 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CDH3P22223 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH3P22223 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CDH3P22223 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
CDH3P22223 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH3P22223 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH3P22223 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.86■□□□□ 0.61
CDH3P22223 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.86■□□□□ 0.61
CDH3P22223 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH3P22223 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.86■□□□□ 0.61
CDH3P22223 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.86■□□□□ 0.61
CDH3P22223 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.86■□□□□ 0.61
CDH3P22223 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH3P22223 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH3P22223 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.86■□□□□ 0.61
CDH3P22223 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
CDH3P22223 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CDH3P22223 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH3P22223 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH3P22223 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH3P22223 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CDH3P22223 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH3P22223 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH3P22223 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CDH3P22223 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.86■□□□□ 0.61
CDH3P22223 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH3P22223 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH3P22223 AL355355.2-201ENST00000442321 338 ntBASIC18.86■□□□□ 0.61
CDH3P22223 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CDH3P22223 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.86■□□□□ 0.61
CDH3P22223 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.86■□□□□ 0.61
CDH3P22223 C1QL1P1-201ENST00000568105 661 ntBASIC18.86■□□□□ 0.61
CDH3P22223 AL353708.3-201ENST00000610272 989 ntBASIC18.86■□□□□ 0.61
CDH3P22223 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH3P22223 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH3P22223 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH3P22223 AL691432.2-201ENST00000607222 2038 ntBASIC18.86■□□□□ 0.61
CDH3P22223 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH3P22223 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH3P22223 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.86■□□□□ 0.61
CDH3P22223 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH3P22223 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH3P22223 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH3P22223 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CDH3P22223 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
CDH3P22223 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH3P22223 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH3P22223 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms