Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.47■□□□□ 0.87
PTPN1P18031 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.47■□□□□ 0.87
PTPN1P18031 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.47■□□□□ 0.87
PTPN1P18031 DGCR10-201ENST00000609839 495 ntBASIC20.47■□□□□ 0.87
PTPN1P18031 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.47■□□□□ 0.87
PTPN1P18031 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN1P18031 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.47■□□□□ 0.87
PTPN1P18031 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PTPN1P18031 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN1P18031 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.47■□□□□ 0.87
PTPN1P18031 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN1P18031 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN1P18031 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN1P18031 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN1P18031 AL158211.5-201ENST00000623583 2518 ntBASIC20.47■□□□□ 0.87
PTPN1P18031 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.47■□□□□ 0.87
PTPN1P18031 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.46■□□□□ 0.87
PTPN1P18031 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
PTPN1P18031 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN1P18031 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN1P18031 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN1P18031 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.46■□□□□ 0.87
PTPN1P18031 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN1P18031 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN1P18031 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.46■□□□□ 0.87
PTPN1P18031 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PTPN1P18031 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN1P18031 AC087499.1-201ENST00000418141 1075 ntBASIC20.46■□□□□ 0.87
PTPN1P18031 AL390955.1-201ENST00000428694 934 ntBASIC20.46■□□□□ 0.87
PTPN1P18031 FAM207BP-201ENST00000447172 505 ntBASIC20.46■□□□□ 0.87
PTPN1P18031 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN1P18031 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.46■□□□□ 0.87
PTPN1P18031 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.46■□□□□ 0.87
PTPN1P18031 AC097488.1-201ENST00000507834 756 ntBASIC20.46■□□□□ 0.87
PTPN1P18031 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.46■□□□□ 0.87
PTPN1P18031 FITM1-202ENST00000559294 800 ntBASIC20.46■□□□□ 0.87
PTPN1P18031 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.46■□□□□ 0.87
PTPN1P18031 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.46■□□□□ 0.87
PTPN1P18031 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN1P18031 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.46■□□□□ 0.87
PTPN1P18031 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.46■□□□□ 0.87
PTPN1P18031 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN1P18031 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN1P18031 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN1P18031 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN1P18031 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN1P18031 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PTPN1P18031 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN1P18031 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.87
PTPN1P18031 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN1P18031 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN1P18031 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN1P18031 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN1P18031 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
PTPN1P18031 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.45■□□□□ 0.86
PTPN1P18031 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN1P18031 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.45■□□□□ 0.86
PTPN1P18031 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN1P18031 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.45■□□□□ 0.86
PTPN1P18031 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN1P18031 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
PTPN1P18031 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN1P18031 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PTPN1P18031 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN1P18031 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN1P18031 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.45■□□□□ 0.86
PTPN1P18031 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.45■□□□□ 0.86
PTPN1P18031 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.45■□□□□ 0.86
PTPN1P18031 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
PTPN1P18031 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PTPN1P18031 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN1P18031 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.45■□□□□ 0.86
PTPN1P18031 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PTPN1P18031 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN1P18031 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.45■□□□□ 0.86
PTPN1P18031 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.45■□□□□ 0.86
PTPN1P18031 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.45■□□□□ 0.86
PTPN1P18031 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN1P18031 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN1P18031 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.45■□□□□ 0.86
PTPN1P18031 KRT8P9-201ENST00000558927 1449 ntBASIC20.44■□□□□ 0.86
PTPN1P18031 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
PTPN1P18031 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN1P18031 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN1P18031 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
PTPN1P18031 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN1P18031 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.44■□□□□ 0.86
PTPN1P18031 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN1P18031 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN1P18031 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN1P18031 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN1P18031 AC211429.1-201ENST00000415277 523 ntBASIC20.44■□□□□ 0.86
PTPN1P18031 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.44■□□□□ 0.86
PTPN1P18031 SLC25A1P4-201ENST00000567977 778 ntBASIC20.44■□□□□ 0.86
PTPN1P18031 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.44■□□□□ 0.86
PTPN1P18031 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.44■□□□□ 0.86
PTPN1P18031 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.44■□□□□ 0.86
PTPN1P18031 SDHAP1-207ENST00000440850 2000 ntBASIC20.44■□□□□ 0.86
PTPN1P18031 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PTPN1P18031 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms