Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.34■□□□□ 0.85
KRT3P12035 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.34■□□□□ 0.85
KRT3P12035 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.34■□□□□ 0.85
KRT3P12035 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.34■□□□□ 0.85
KRT3P12035 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRT3P12035 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.33■□□□□ 0.85
KRT3P12035 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.33■□□□□ 0.85
KRT3P12035 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.33■□□□□ 0.85
KRT3P12035 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRT3P12035 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.33■□□□□ 0.85
KRT3P12035 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRT3P12035 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRT3P12035 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
KRT3P12035 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRT3P12035 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRT3P12035 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.33■□□□□ 0.85
KRT3P12035 FAM201B-201ENST00000458407 597 ntBASIC20.33■□□□□ 0.85
KRT3P12035 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KRT3P12035 C1QL1P1-201ENST00000568105 661 ntBASIC20.33■□□□□ 0.85
KRT3P12035 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.33■□□□□ 0.84
KRT3P12035 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.33■□□□□ 0.84
KRT3P12035 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT3P12035 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.32■□□□□ 0.84
KRT3P12035 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT3P12035 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.32■□□□□ 0.84
KRT3P12035 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT3P12035 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.32■□□□□ 0.84
KRT3P12035 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.32■□□□□ 0.84
KRT3P12035 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT3P12035 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT3P12035 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KRT3P12035 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.32■□□□□ 0.84
KRT3P12035 TSPY20P-201ENST00000450910 630 ntBASIC20.32■□□□□ 0.84
KRT3P12035 KRT16P5-201ENST00000455284 522 ntBASIC20.32■□□□□ 0.84
KRT3P12035 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.32■□□□□ 0.84
KRT3P12035 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT3P12035 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
KRT3P12035 AC110285.5-201ENST00000611501 352 ntBASIC20.32■□□□□ 0.84
KRT3P12035 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT3P12035 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.32■□□□□ 0.84
KRT3P12035 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KRT3P12035 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.32■□□□□ 0.84
KRT3P12035 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.32■□□□□ 0.84
KRT3P12035 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT3P12035 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.32■□□□□ 0.84
KRT3P12035 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT3P12035 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT3P12035 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT3P12035 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT3P12035 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
KRT3P12035 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT3P12035 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT3P12035 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT3P12035 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.31■□□□□ 0.84
KRT3P12035 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT3P12035 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT3P12035 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT3P12035 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT3P12035 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.31■□□□□ 0.84
KRT3P12035 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
KRT3P12035 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.31■□□□□ 0.84
KRT3P12035 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.31■□□□□ 0.84
KRT3P12035 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.31■□□□□ 0.84
KRT3P12035 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.31■□□□□ 0.84
KRT3P12035 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
KRT3P12035 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT3P12035 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT3P12035 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT3P12035 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
KRT3P12035 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT3P12035 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.31■□□□□ 0.84
KRT3P12035 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT3P12035 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.3■□□□□ 0.84
KRT3P12035 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT3P12035 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.3■□□□□ 0.84
KRT3P12035 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KRT3P12035 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT3P12035 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT3P12035 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT3P12035 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KRT3P12035 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT3P12035 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT3P12035 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.3■□□□□ 0.84
KRT3P12035 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.3■□□□□ 0.84
KRT3P12035 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT3P12035 C1QBPP2-201ENST00000528754 825 ntBASIC20.3■□□□□ 0.84
KRT3P12035 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.3■□□□□ 0.84
KRT3P12035 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.3■□□□□ 0.84
KRT3P12035 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.3■□□□□ 0.84
KRT3P12035 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KRT3P12035 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KRT3P12035 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.3■□□□□ 0.84
KRT3P12035 AC087289.5-201ENST00000586076 3175 ntBASIC20.3■□□□□ 0.84
KRT3P12035 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
KRT3P12035 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT3P12035 LINC01465-201ENST00000408887 1940 ntBASIC20.29■□□□□ 0.84
KRT3P12035 AC018445.3-201ENST00000624177 1945 ntBASIC20.29■□□□□ 0.84
KRT3P12035 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT3P12035 TEX21P-204ENST00000641479 1693 ntBASIC20.29■□□□□ 0.84
KRT3P12035 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms