Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNB1P11230 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRNB1P11230 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CHRNB1P11230 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
CHRNB1P11230 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.59■□□□□ 0.73
CHRNB1P11230 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNB1P11230 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.59■□□□□ 0.73
CHRNB1P11230 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
CHRNB1P11230 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRNB1P11230 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.59■□□□□ 0.73
CHRNB1P11230 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CHRNB1P11230 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNB1P11230 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNB1P11230 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRNB1P11230 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRNB1P11230 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CHRNB1P11230 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CHRNB1P11230 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.58■□□□□ 0.73
CHRNB1P11230 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.58■□□□□ 0.72
CHRNB1P11230 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.58■□□□□ 0.72
CHRNB1P11230 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.58■□□□□ 0.72
CHRNB1P11230 AC112907.2-201ENST00000448639 330 ntBASIC19.58■□□□□ 0.72
CHRNB1P11230 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.58■□□□□ 0.72
CHRNB1P11230 AC083849.1-201ENST00000615227 514 ntBASIC19.58■□□□□ 0.72
CHRNB1P11230 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.58■□□□□ 0.72
CHRNB1P11230 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.58■□□□□ 0.72
CHRNB1P11230 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHRNB1P11230 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.58■□□□□ 0.72
CHRNB1P11230 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.58■□□□□ 0.72
CHRNB1P11230 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHRNB1P11230 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.58■□□□□ 0.72
CHRNB1P11230 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.58■□□□□ 0.72
CHRNB1P11230 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHRNB1P11230 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNB1P11230 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNB1P11230 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.57■□□□□ 0.72
CHRNB1P11230 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.57■□□□□ 0.72
CHRNB1P11230 AP000523.1-201ENST00000398242 1049 ntBASIC19.57■□□□□ 0.72
CHRNB1P11230 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.57■□□□□ 0.72
CHRNB1P11230 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.57■□□□□ 0.72
CHRNB1P11230 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.57■□□□□ 0.72
CHRNB1P11230 ZNF444P1-201ENST00000559497 298 ntBASIC19.57■□□□□ 0.72
CHRNB1P11230 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.57■□□□□ 0.72
CHRNB1P11230 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
CHRNB1P11230 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNB1P11230 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CHRNB1P11230 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.57■□□□□ 0.72
CHRNB1P11230 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.57■□□□□ 0.72
CHRNB1P11230 HYMAI.1-201ENST00000620949 238 ntBASIC19.57■□□□□ 0.72
CHRNB1P11230 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.57■□□□□ 0.72
CHRNB1P11230 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CHRNB1P11230 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.57■□□□□ 0.72
CHRNB1P11230 AP001271.2-201ENST00000624018 1556 ntBASIC19.57■□□□□ 0.72
CHRNB1P11230 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB1P11230 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CHRNB1P11230 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB1P11230 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CHRNB1P11230 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
CHRNB1P11230 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.56■□□□□ 0.72
CHRNB1P11230 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.56■□□□□ 0.72
CHRNB1P11230 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB1P11230 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB1P11230 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB1P11230 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
CHRNB1P11230 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.56■□□□□ 0.72
CHRNB1P11230 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB1P11230 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB1P11230 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB1P11230 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB1P11230 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB1P11230 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.56■□□□□ 0.72
CHRNB1P11230 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.56■□□□□ 0.72
CHRNB1P11230 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB1P11230 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB1P11230 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.56■□□□□ 0.72
CHRNB1P11230 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB1P11230 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.56■□□□□ 0.72
CHRNB1P11230 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB1P11230 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.56■□□□□ 0.72
CHRNB1P11230 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.56■□□□□ 0.72
CHRNB1P11230 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.56■□□□□ 0.72
CHRNB1P11230 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB1P11230 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB1P11230 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB1P11230 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB1P11230 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CHRNB1P11230 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CHRNB1P11230 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.55■□□□□ 0.72
CHRNB1P11230 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.55■□□□□ 0.72
CHRNB1P11230 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.55■□□□□ 0.72
CHRNB1P11230 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB1P11230 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB1P11230 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB1P11230 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB1P11230 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.55■□□□□ 0.72
CHRNB1P11230 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.55■□□□□ 0.72
CHRNB1P11230 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.55■□□□□ 0.72
CHRNB1P11230 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.55■□□□□ 0.72
CHRNB1P11230 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.55■□□□□ 0.72
CHRNB1P11230 NEK4P2-201ENST00000580004 1012 ntBASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms