Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC25.62■■□□□ 1.69
CSB-PGBD3P0DP91 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC25.62■■□□□ 1.69
CSB-PGBD3P0DP91 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CSB-PGBD3P0DP91 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CSB-PGBD3P0DP91 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
CSB-PGBD3P0DP91 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CSB-PGBD3P0DP91 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
CSB-PGBD3P0DP91 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CSB-PGBD3P0DP91 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CSB-PGBD3P0DP91 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
CSB-PGBD3P0DP91 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC25.61■■□□□ 1.69
CSB-PGBD3P0DP91 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CSB-PGBD3P0DP91 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CSB-PGBD3P0DP91 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC25.61■■□□□ 1.69
CSB-PGBD3P0DP91 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC25.61■■□□□ 1.69
CSB-PGBD3P0DP91 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
CSB-PGBD3P0DP91 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CSB-PGBD3P0DP91 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CSB-PGBD3P0DP91 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC25.61■■□□□ 1.69
CSB-PGBD3P0DP91 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC25.61■■□□□ 1.69
CSB-PGBD3P0DP91 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC25.61■■□□□ 1.69
CSB-PGBD3P0DP91 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC25.6■■□□□ 1.69
CSB-PGBD3P0DP91 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
CSB-PGBD3P0DP91 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
CSB-PGBD3P0DP91 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CSB-PGBD3P0DP91 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CSB-PGBD3P0DP91 AIRN-201ENST00000601203 4374 ntBASIC25.6■■□□□ 1.69
CSB-PGBD3P0DP91 BUB3-202ENST00000368859 667 ntTSL 3 BASIC25.6■■□□□ 1.69
CSB-PGBD3P0DP91 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC25.6■■□□□ 1.69
CSB-PGBD3P0DP91 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC25.6■■□□□ 1.69
CSB-PGBD3P0DP91 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC25.6■■□□□ 1.69
CSB-PGBD3P0DP91 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
CSB-PGBD3P0DP91 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC25.6■■□□□ 1.69
CSB-PGBD3P0DP91 FGF14-AS2-201ENST00000606448 1074 ntBASIC25.6■■□□□ 1.69
CSB-PGBD3P0DP91 IRF5-214ENST00000613821 595 ntTSL 5 BASIC25.6■■□□□ 1.69
CSB-PGBD3P0DP91 BCL10-202ENST00000620248 774 ntTSL 5 BASIC25.6■■□□□ 1.69
CSB-PGBD3P0DP91 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
CSB-PGBD3P0DP91 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC25.6■■□□□ 1.69
CSB-PGBD3P0DP91 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC25.6■■□□□ 1.69
CSB-PGBD3P0DP91 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CSB-PGBD3P0DP91 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC25.59■■□□□ 1.69
CSB-PGBD3P0DP91 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
CSB-PGBD3P0DP91 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CSB-PGBD3P0DP91 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
CSB-PGBD3P0DP91 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CSB-PGBD3P0DP91 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CSB-PGBD3P0DP91 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CSB-PGBD3P0DP91 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CSB-PGBD3P0DP91 ATP5G2P1-201ENST00000433580 426 ntBASIC25.59■■□□□ 1.69
CSB-PGBD3P0DP91 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CSB-PGBD3P0DP91 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC25.59■■□□□ 1.69
CSB-PGBD3P0DP91 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC25.59■■□□□ 1.69
CSB-PGBD3P0DP91 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CSB-PGBD3P0DP91 LINC00565-201ENST00000562710 2331 ntBASIC25.59■■□□□ 1.69
CSB-PGBD3P0DP91 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
CSB-PGBD3P0DP91 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
CSB-PGBD3P0DP91 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CSB-PGBD3P0DP91 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
CSB-PGBD3P0DP91 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC25.58■■□□□ 1.69
CSB-PGBD3P0DP91 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC25.58■■□□□ 1.69
CSB-PGBD3P0DP91 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC25.58■■□□□ 1.69
CSB-PGBD3P0DP91 GAD2-202ENST00000376248 680 ntTSL 5 BASIC25.58■■□□□ 1.69
CSB-PGBD3P0DP91 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
CSB-PGBD3P0DP91 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC25.58■■□□□ 1.69
CSB-PGBD3P0DP91 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC25.58■■□□□ 1.69
CSB-PGBD3P0DP91 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CSB-PGBD3P0DP91 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
CSB-PGBD3P0DP91 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
CSB-PGBD3P0DP91 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
CSB-PGBD3P0DP91 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CSB-PGBD3P0DP91 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CSB-PGBD3P0DP91 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CSB-PGBD3P0DP91 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CSB-PGBD3P0DP91 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CSB-PGBD3P0DP91 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC25.57■■□□□ 1.68
CSB-PGBD3P0DP91 MIR4674-201ENST00000582457 87 ntBASIC25.57■■□□□ 1.68
CSB-PGBD3P0DP91 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC25.57■■□□□ 1.68
CSB-PGBD3P0DP91 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CSB-PGBD3P0DP91 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CSB-PGBD3P0DP91 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CSB-PGBD3P0DP91 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CSB-PGBD3P0DP91 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CSB-PGBD3P0DP91 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC25.57■■□□□ 1.68
CSB-PGBD3P0DP91 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CSB-PGBD3P0DP91 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CSB-PGBD3P0DP91 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC25.56■■□□□ 1.68
CSB-PGBD3P0DP91 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
CSB-PGBD3P0DP91 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC25.56■■□□□ 1.68
CSB-PGBD3P0DP91 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CSB-PGBD3P0DP91 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
CSB-PGBD3P0DP91 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC25.56■■□□□ 1.68
CSB-PGBD3P0DP91 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CSB-PGBD3P0DP91 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC25.56■■□□□ 1.68
CSB-PGBD3P0DP91 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CSB-PGBD3P0DP91 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CSB-PGBD3P0DP91 AC092119.3-201ENST00000612618 583 ntBASIC25.56■■□□□ 1.68
CSB-PGBD3P0DP91 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
CSB-PGBD3P0DP91 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC25.56■■□□□ 1.68
CSB-PGBD3P0DP91 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CSB-PGBD3P0DP91 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms