Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQB2P05538 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
HLA-DQB2P05538 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HLA-DQB2P05538 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DQB2P05538 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
HLA-DQB2P05538 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DQB2P05538 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DQB2P05538 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQB2P05538 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQB2P05538 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HLA-DQB2P05538 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
HLA-DQB2P05538 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HLA-DQB2P05538 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQB2P05538 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQB2P05538 RPS2P4-201ENST00000476944 856 ntBASIC19.6■□□□□ 0.73
HLA-DQB2P05538 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DQB2P05538 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DQB2P05538 AF186192.3-201ENST00000583427 947 ntBASIC19.6■□□□□ 0.73
HLA-DQB2P05538 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DQB2P05538 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.6■□□□□ 0.73
HLA-DQB2P05538 AL353708.3-201ENST00000610272 989 ntBASIC19.6■□□□□ 0.73
HLA-DQB2P05538 AL445675.2-201ENST00000620291 557 ntBASIC19.6■□□□□ 0.73
HLA-DQB2P05538 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DQB2P05538 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQB2P05538 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DQB2P05538 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.59■□□□□ 0.73
HLA-DQB2P05538 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQB2P05538 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQB2P05538 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQB2P05538 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQB2P05538 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.59■□□□□ 0.73
HLA-DQB2P05538 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQB2P05538 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQB2P05538 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQB2P05538 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQB2P05538 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQB2P05538 AL353807.1-201ENST00000427475 662 ntBASIC19.59■□□□□ 0.73
HLA-DQB2P05538 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.59■□□□□ 0.73
HLA-DQB2P05538 UBE2SP1-201ENST00000450587 669 ntBASIC19.59■□□□□ 0.73
HLA-DQB2P05538 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.59■□□□□ 0.73
HLA-DQB2P05538 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.59■□□□□ 0.73
HLA-DQB2P05538 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
HLA-DQB2P05538 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.59■□□□□ 0.73
HLA-DQB2P05538 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HLA-DQB2P05538 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQB2P05538 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQB2P05538 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.58■□□□□ 0.73
HLA-DQB2P05538 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.58■□□□□ 0.73
HLA-DQB2P05538 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.58■□□□□ 0.73
HLA-DQB2P05538 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-DQB2P05538 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-DQB2P05538 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-DQB2P05538 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DQB2P05538 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.58■□□□□ 0.72
HLA-DQB2P05538 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DQB2P05538 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DQB2P05538 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DQB2P05538 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DQB2P05538 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DQB2P05538 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DQB2P05538 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
HLA-DQB2P05538 AC141586.3-201ENST00000562166 1838 ntBASIC19.58■□□□□ 0.72
HLA-DQB2P05538 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQB2P05538 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.57■□□□□ 0.72
HLA-DQB2P05538 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQB2P05538 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQB2P05538 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQB2P05538 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQB2P05538 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQB2P05538 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQB2P05538 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQB2P05538 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQB2P05538 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQB2P05538 AC004980.1-204ENST00000429707 299 ntBASIC19.57■□□□□ 0.72
HLA-DQB2P05538 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HLA-DQB2P05538 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQB2P05538 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.57■□□□□ 0.72
HLA-DQB2P05538 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.57■□□□□ 0.72
HLA-DQB2P05538 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.57■□□□□ 0.72
HLA-DQB2P05538 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQB2P05538 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.57■□□□□ 0.72
HLA-DQB2P05538 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQB2P05538 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQB2P05538 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.57■□□□□ 0.72
HLA-DQB2P05538 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQB2P05538 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.57■□□□□ 0.72
HLA-DQB2P05538 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQB2P05538 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
HLA-DQB2P05538 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.56■□□□□ 0.72
HLA-DQB2P05538 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQB2P05538 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQB2P05538 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQB2P05538 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQB2P05538 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQB2P05538 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQB2P05538 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQB2P05538 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQB2P05538 KSR1P1-201ENST00000446298 240 ntBASIC19.56■□□□□ 0.72
HLA-DQB2P05538 Z85996.1-201ENST00000494644 937 ntBASIC19.56■□□□□ 0.72
HLA-DQB2P05538 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms