Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.29■□□□□ 0.2
HLA-AP01891 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-AP01891 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-AP01891 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-AP01891 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-AP01891 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-AP01891 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-AP01891 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
HLA-AP01891 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-AP01891 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-AP01891 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-AP01891 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-AP01891 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HLA-AP01891 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.29■□□□□ 0.2
HLA-AP01891 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-AP01891 PTBP1P-201ENST00000554374 1601 ntBASIC16.28■□□□□ 0.2
HLA-AP01891 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-AP01891 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-AP01891 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-AP01891 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
HLA-AP01891 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.28■□□□□ 0.2
HLA-AP01891 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.28■□□□□ 0.2
HLA-AP01891 DUX4L2-201ENST00000561772 1275 ntBASIC16.28■□□□□ 0.2
HLA-AP01891 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-AP01891 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.28■□□□□ 0.2
HLA-AP01891 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
HLA-AP01891 MIR6821-201ENST00000617625 74 ntBASIC16.28■□□□□ 0.2
HLA-AP01891 DUX4L6-201ENST00000626483 1275 ntBASIC16.28■□□□□ 0.2
HLA-AP01891 DUX4L1-201ENST00000627662 1275 ntBASIC16.28■□□□□ 0.2
HLA-AP01891 DUX4L8-201ENST00000629013 1275 ntBASIC16.28■□□□□ 0.2
HLA-AP01891 DUX4L3-201ENST00000630187 1275 ntBASIC16.28■□□□□ 0.2
HLA-AP01891 DUX4L7-201ENST00000630678 1275 ntBASIC16.28■□□□□ 0.2
HLA-AP01891 DUX4L5-201ENST00000630834 1275 ntBASIC16.28■□□□□ 0.2
HLA-AP01891 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-AP01891 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-AP01891 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-AP01891 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.28■□□□□ 0.2
HLA-AP01891 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HLA-AP01891 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-AP01891 AC141586.3-201ENST00000562166 1838 ntBASIC16.28■□□□□ 0.2
HLA-AP01891 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-AP01891 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-AP01891 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HLA-AP01891 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-AP01891 AL031598.1-201ENST00000561511 1773 ntBASIC16.28■□□□□ 0.2
HLA-AP01891 Z98044.1-201ENST00000632503 1764 ntBASIC16.28■□□□□ 0.2
HLA-AP01891 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-AP01891 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
HLA-AP01891 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.28■□□□□ 0.2
HLA-AP01891 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-AP01891 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-AP01891 AC068880.1-201ENST00000507289 2297 ntBASIC16.28■□□□□ 0.2
HLA-AP01891 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
HLA-AP01891 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-AP01891 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-AP01891 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-AP01891 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-AP01891 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.27■□□□□ 0.2
HLA-AP01891 AC026271.2-201ENST00000428091 497 ntBASIC16.27■□□□□ 0.2
HLA-AP01891 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-AP01891 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-AP01891 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HLA-AP01891 AC243732.1-201ENST00000612648 864 ntBASIC16.27■□□□□ 0.2
HLA-AP01891 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.27■□□□□ 0.2
HLA-AP01891 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-AP01891 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
HLA-AP01891 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-AP01891 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.27■□□□□ 0.19
HLA-AP01891 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
HLA-AP01891 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-AP01891 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-AP01891 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-AP01891 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-AP01891 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
HLA-AP01891 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-AP01891 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
HLA-AP01891 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.27■□□□□ 0.19
HLA-AP01891 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-AP01891 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-AP01891 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-AP01891 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-AP01891 PKD1P1-201ENST00000458669 6805 ntBASIC16.26■□□□□ 0.19
HLA-AP01891 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-AP01891 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-AP01891 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-AP01891 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-AP01891 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HLA-AP01891 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HLA-AP01891 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-AP01891 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-AP01891 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
HLA-AP01891 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-AP01891 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.26■□□□□ 0.19
HLA-AP01891 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HLA-AP01891 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-AP01891 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-AP01891 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-AP01891 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-AP01891 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-AP01891 AC087633.2-202ENST00000565166 1439 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms