Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLPTM1O96005 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.18■□□□□ 0.5
CLPTM1O96005 HTR7P1-202ENST00000624664 4411 ntBASIC18.18■□□□□ 0.5
CLPTM1O96005 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLPTM1O96005 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLPTM1O96005 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.18■□□□□ 0.5
CLPTM1O96005 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.18■□□□□ 0.5
CLPTM1O96005 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.18■□□□□ 0.5
CLPTM1O96005 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CLPTM1O96005 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.18■□□□□ 0.5
CLPTM1O96005 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.18■□□□□ 0.5
CLPTM1O96005 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLPTM1O96005 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CLPTM1O96005 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.18■□□□□ 0.5
CLPTM1O96005 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLPTM1O96005 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CLPTM1O96005 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLPTM1O96005 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLPTM1O96005 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLPTM1O96005 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLPTM1O96005 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLPTM1O96005 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLPTM1O96005 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.17■□□□□ 0.5
CLPTM1O96005 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.17■□□□□ 0.5
CLPTM1O96005 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLPTM1O96005 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLPTM1O96005 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CLPTM1O96005 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.17■□□□□ 0.5
CLPTM1O96005 AC137761.2-201ENST00000561729 223 ntBASIC18.17■□□□□ 0.5
CLPTM1O96005 EEF1DP3-203ENST00000566025 782 ntBASIC18.17■□□□□ 0.5
CLPTM1O96005 AC145350.3-201ENST00000569033 163 ntBASIC18.17■□□□□ 0.5
CLPTM1O96005 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLPTM1O96005 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
CLPTM1O96005 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CLPTM1O96005 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLPTM1O96005 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLPTM1O96005 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CLPTM1O96005 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLPTM1O96005 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CLPTM1O96005 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CLPTM1O96005 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLPTM1O96005 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.16■□□□□ 0.5
CLPTM1O96005 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.16■□□□□ 0.5
CLPTM1O96005 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.16■□□□□ 0.5
CLPTM1O96005 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLPTM1O96005 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLPTM1O96005 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CLPTM1O96005 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLPTM1O96005 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.16■□□□□ 0.5
CLPTM1O96005 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLPTM1O96005 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLPTM1O96005 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.16■□□□□ 0.5
CLPTM1O96005 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.16■□□□□ 0.5
CLPTM1O96005 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.16■□□□□ 0.5
CLPTM1O96005 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.16■□□□□ 0.5
CLPTM1O96005 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLPTM1O96005 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLPTM1O96005 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLPTM1O96005 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.16■□□□□ 0.5
CLPTM1O96005 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLPTM1O96005 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLPTM1O96005 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLPTM1O96005 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.16■□□□□ 0.5
CLPTM1O96005 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLPTM1O96005 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLPTM1O96005 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLPTM1O96005 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CLPTM1O96005 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.16■□□□□ 0.5
CLPTM1O96005 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.16■□□□□ 0.5
CLPTM1O96005 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLPTM1O96005 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLPTM1O96005 AL161938.1-201ENST00000569833 2180 ntBASIC18.15■□□□□ 0.5
CLPTM1O96005 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CLPTM1O96005 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLPTM1O96005 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLPTM1O96005 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CLPTM1O96005 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLPTM1O96005 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLPTM1O96005 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLPTM1O96005 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLPTM1O96005 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLPTM1O96005 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.15■□□□□ 0.5
CLPTM1O96005 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.15■□□□□ 0.5
CLPTM1O96005 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.15■□□□□ 0.5
CLPTM1O96005 AP001160.3-201ENST00000601484 763 ntBASIC18.15■□□□□ 0.5
CLPTM1O96005 AC092437.1-201ENST00000624794 1048 ntBASIC18.15■□□□□ 0.5
CLPTM1O96005 AC009237.14-201ENST00000609975 1594 ntBASIC18.15■□□□□ 0.5
CLPTM1O96005 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.15■□□□□ 0.5
CLPTM1O96005 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.15■□□□□ 0.5
CLPTM1O96005 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLPTM1O96005 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CLPTM1O96005 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CLPTM1O96005 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLPTM1O96005 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLPTM1O96005 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLPTM1O96005 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.14■□□□□ 0.5
CLPTM1O96005 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.14■□□□□ 0.5
CLPTM1O96005 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLPTM1O96005 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.14■□□□□ 0.5
CLPTM1O96005 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms