Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
GGPS1O95749 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
GGPS1O95749 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.7■■□□□ 1.06
GGPS1O95749 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
GGPS1O95749 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
GGPS1O95749 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
GGPS1O95749 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.69■■□□□ 1.06
GGPS1O95749 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.69■■□□□ 1.06
GGPS1O95749 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GGPS1O95749 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GGPS1O95749 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GGPS1O95749 HMGA1P5-201ENST00000412453 271 ntBASIC21.69■■□□□ 1.06
GGPS1O95749 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.69■■□□□ 1.06
GGPS1O95749 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.69■■□□□ 1.06
GGPS1O95749 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.69■■□□□ 1.06
GGPS1O95749 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.69■■□□□ 1.06
GGPS1O95749 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.69■■□□□ 1.06
GGPS1O95749 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
GGPS1O95749 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.69■■□□□ 1.06
GGPS1O95749 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
GGPS1O95749 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GGPS1O95749 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GGPS1O95749 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.69■■□□□ 1.06
GGPS1O95749 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.68■■□□□ 1.06
GGPS1O95749 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
GGPS1O95749 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GGPS1O95749 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GGPS1O95749 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GGPS1O95749 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
GGPS1O95749 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.68■■□□□ 1.06
GGPS1O95749 AC007663.1-201ENST00000438948 1240 ntBASIC21.68■■□□□ 1.06
GGPS1O95749 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.68■■□□□ 1.06
GGPS1O95749 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.68■■□□□ 1.06
GGPS1O95749 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
GGPS1O95749 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GGPS1O95749 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GGPS1O95749 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.68■■□□□ 1.06
GGPS1O95749 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
GGPS1O95749 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
GGPS1O95749 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.68■■□□□ 1.06
GGPS1O95749 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GGPS1O95749 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GGPS1O95749 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GGPS1O95749 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GGPS1O95749 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
GGPS1O95749 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GGPS1O95749 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
GGPS1O95749 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GGPS1O95749 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.67■■□□□ 1.06
GGPS1O95749 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
GGPS1O95749 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.67■■□□□ 1.06
GGPS1O95749 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GGPS1O95749 AC092338.2-201ENST00000568827 1415 ntBASIC21.67■■□□□ 1.06
GGPS1O95749 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GGPS1O95749 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.67■■□□□ 1.06
GGPS1O95749 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GGPS1O95749 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GGPS1O95749 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GGPS1O95749 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GGPS1O95749 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.67■■□□□ 1.06
GGPS1O95749 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.67■■□□□ 1.06
GGPS1O95749 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GGPS1O95749 CKBP1-201ENST00000565489 1086 ntBASIC21.67■■□□□ 1.06
GGPS1O95749 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GGPS1O95749 AL023803.3-201ENST00000615559 522 ntBASIC21.67■■□□□ 1.06
GGPS1O95749 AC112907.3-201ENST00000577781 2400 ntBASIC21.67■■□□□ 1.06
GGPS1O95749 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GGPS1O95749 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.67■■□□□ 1.06
GGPS1O95749 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GGPS1O95749 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GGPS1O95749 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GGPS1O95749 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.66■■□□□ 1.06
GGPS1O95749 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.66■■□□□ 1.06
GGPS1O95749 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GGPS1O95749 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.66■■□□□ 1.06
GGPS1O95749 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
GGPS1O95749 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
GGPS1O95749 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GGPS1O95749 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GGPS1O95749 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
GGPS1O95749 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GGPS1O95749 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.66■■□□□ 1.06
GGPS1O95749 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GGPS1O95749 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
GGPS1O95749 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.66■■□□□ 1.06
GGPS1O95749 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
GGPS1O95749 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.66■■□□□ 1.06
GGPS1O95749 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.66■■□□□ 1.06
GGPS1O95749 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.66■■□□□ 1.06
GGPS1O95749 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
GGPS1O95749 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GGPS1O95749 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GGPS1O95749 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GGPS1O95749 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GGPS1O95749 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GGPS1O95749 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.65■■□□□ 1.06
GGPS1O95749 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GGPS1O95749 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GGPS1O95749 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
GGPS1O95749 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms