Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCAF4O95104 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAF4O95104 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAF4O95104 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.79■□□□□ 0.12
SCAF4O95104 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
SCAF4O95104 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.79■□□□□ 0.12
SCAF4O95104 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.79■□□□□ 0.12
SCAF4O95104 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAF4O95104 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAF4O95104 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAF4O95104 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAF4O95104 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.79■□□□□ 0.12
SCAF4O95104 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAF4O95104 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
SCAF4O95104 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCAF4O95104 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SCAF4O95104 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAF4O95104 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAF4O95104 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAF4O95104 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
SCAF4O95104 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCAF4O95104 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC15.79■□□□□ 0.12
SCAF4O95104 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC15.79■□□□□ 0.12
SCAF4O95104 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCAF4O95104 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.79■□□□□ 0.12
SCAF4O95104 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC15.79■□□□□ 0.12
SCAF4O95104 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SCAF4O95104 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SCAF4O95104 PCDHB18P-201ENST00000524813 2368 ntBASIC15.79■□□□□ 0.12
SCAF4O95104 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SCAF4O95104 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAF4O95104 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAF4O95104 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SCAF4O95104 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SCAF4O95104 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAF4O95104 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCAF4O95104 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.78■□□□□ 0.12
SCAF4O95104 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SCAF4O95104 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.78■□□□□ 0.12
SCAF4O95104 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SCAF4O95104 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.78■□□□□ 0.12
SCAF4O95104 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCAF4O95104 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SCAF4O95104 KRT8P17-201ENST00000453110 1448 ntBASIC15.78■□□□□ 0.12
SCAF4O95104 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.78■□□□□ 0.12
SCAF4O95104 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.78■□□□□ 0.12
SCAF4O95104 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.78■□□□□ 0.12
SCAF4O95104 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SCAF4O95104 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
SCAF4O95104 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCAF4O95104 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SCAF4O95104 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCAF4O95104 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.78■□□□□ 0.12
SCAF4O95104 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.78■□□□□ 0.12
SCAF4O95104 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.78■□□□□ 0.12
SCAF4O95104 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.78■□□□□ 0.12
SCAF4O95104 BRI3-207ENST00000539286 699 ntTSL 2 BASIC15.78■□□□□ 0.12
SCAF4O95104 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SCAF4O95104 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SCAF4O95104 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC15.78■□□□□ 0.12
SCAF4O95104 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC15.78■□□□□ 0.12
SCAF4O95104 AC011767.1-201ENST00000617410 1153 ntBASIC15.78■□□□□ 0.12
SCAF4O95104 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCAF4O95104 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCAF4O95104 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCAF4O95104 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCAF4O95104 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCAF4O95104 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCAF4O95104 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SCAF4O95104 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SCAF4O95104 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCAF4O95104 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCAF4O95104 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCAF4O95104 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
SCAF4O95104 AL390961.4-201ENST00000623958 2535 ntBASIC15.77■□□□□ 0.12
SCAF4O95104 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCAF4O95104 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCAF4O95104 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SCAF4O95104 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.77■□□□□ 0.12
SCAF4O95104 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SCAF4O95104 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCAF4O95104 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SCAF4O95104 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCAF4O95104 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SCAF4O95104 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SCAF4O95104 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCAF4O95104 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCAF4O95104 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
SCAF4O95104 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SCAF4O95104 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCAF4O95104 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.77■□□□□ 0.12
SCAF4O95104 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC15.77■□□□□ 0.12
SCAF4O95104 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.77■□□□□ 0.12
SCAF4O95104 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCAF4O95104 AL031963.3-201ENST00000606441 850 ntBASIC15.77■□□□□ 0.12
SCAF4O95104 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.77■□□□□ 0.12
SCAF4O95104 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SCAF4O95104 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SCAF4O95104 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCAF4O95104 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms