Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRCH4O75427 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LRCH4O75427 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
LRCH4O75427 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRCH4O75427 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRCH4O75427 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRCH4O75427 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.11■□□□□ 0.81
LRCH4O75427 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.11■□□□□ 0.81
LRCH4O75427 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.11■□□□□ 0.81
LRCH4O75427 KRT16P5-201ENST00000455284 522 ntBASIC20.11■□□□□ 0.81
LRCH4O75427 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.11■□□□□ 0.81
LRCH4O75427 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LRCH4O75427 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.11■□□□□ 0.81
LRCH4O75427 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRCH4O75427 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRCH4O75427 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
LRCH4O75427 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LRCH4O75427 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRCH4O75427 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
LRCH4O75427 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRCH4O75427 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRCH4O75427 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRCH4O75427 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRCH4O75427 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.1■□□□□ 0.81
LRCH4O75427 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
LRCH4O75427 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LRCH4O75427 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.1■□□□□ 0.81
LRCH4O75427 AC110285.5-201ENST00000611501 352 ntBASIC20.1■□□□□ 0.81
LRCH4O75427 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.1■□□□□ 0.81
LRCH4O75427 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.1■□□□□ 0.81
LRCH4O75427 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRCH4O75427 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRCH4O75427 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRCH4O75427 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
LRCH4O75427 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
LRCH4O75427 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
LRCH4O75427 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.1■□□□□ 0.81
LRCH4O75427 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRCH4O75427 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.1■□□□□ 0.81
LRCH4O75427 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.1■□□□□ 0.81
LRCH4O75427 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.09■□□□□ 0.81
LRCH4O75427 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.09■□□□□ 0.81
LRCH4O75427 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRCH4O75427 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.09■□□□□ 0.81
LRCH4O75427 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.09■□□□□ 0.81
LRCH4O75427 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
LRCH4O75427 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRCH4O75427 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRCH4O75427 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.09■□□□□ 0.81
LRCH4O75427 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.09■□□□□ 0.81
LRCH4O75427 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.09■□□□□ 0.81
LRCH4O75427 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LRCH4O75427 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
LRCH4O75427 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.09■□□□□ 0.81
LRCH4O75427 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.09■□□□□ 0.81
LRCH4O75427 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LRCH4O75427 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
LRCH4O75427 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.09■□□□□ 0.81
LRCH4O75427 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.09■□□□□ 0.81
LRCH4O75427 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.09■□□□□ 0.81
LRCH4O75427 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRCH4O75427 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRCH4O75427 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRCH4O75427 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRCH4O75427 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRCH4O75427 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LRCH4O75427 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRCH4O75427 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRCH4O75427 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRCH4O75427 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.08■□□□□ 0.81
LRCH4O75427 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LRCH4O75427 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
LRCH4O75427 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LRCH4O75427 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.08■□□□□ 0.81
LRCH4O75427 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.08■□□□□ 0.81
LRCH4O75427 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.08■□□□□ 0.81
LRCH4O75427 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.08■□□□□ 0.81
LRCH4O75427 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.08■□□□□ 0.81
LRCH4O75427 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRCH4O75427 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LRCH4O75427 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LRCH4O75427 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.08■□□□□ 0.8
LRCH4O75427 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRCH4O75427 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.08■□□□□ 0.8
LRCH4O75427 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.07■□□□□ 0.8
LRCH4O75427 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH4O75427 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH4O75427 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH4O75427 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH4O75427 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH4O75427 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
LRCH4O75427 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH4O75427 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH4O75427 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH4O75427 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH4O75427 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH4O75427 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH4O75427 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH4O75427 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH4O75427 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms