Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.93■□□□□ 0.78
TSPAN3O60637 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.93■□□□□ 0.78
TSPAN3O60637 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.93■□□□□ 0.78
TSPAN3O60637 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TSPAN3O60637 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TSPAN3O60637 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TSPAN3O60637 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
TSPAN3O60637 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.92■□□□□ 0.78
TSPAN3O60637 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
TSPAN3O60637 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TSPAN3O60637 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TSPAN3O60637 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TSPAN3O60637 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.92■□□□□ 0.78
TSPAN3O60637 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TSPAN3O60637 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.92■□□□□ 0.78
TSPAN3O60637 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TSPAN3O60637 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TSPAN3O60637 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TSPAN3O60637 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TSPAN3O60637 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TSPAN3O60637 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.92■□□□□ 0.78
TSPAN3O60637 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TSPAN3O60637 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.92■□□□□ 0.78
TSPAN3O60637 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TSPAN3O60637 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TSPAN3O60637 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.91■□□□□ 0.78
TSPAN3O60637 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.91■□□□□ 0.78
TSPAN3O60637 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TSPAN3O60637 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TSPAN3O60637 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TSPAN3O60637 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TSPAN3O60637 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TSPAN3O60637 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TSPAN3O60637 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.91■□□□□ 0.78
TSPAN3O60637 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TSPAN3O60637 FAM207BP-201ENST00000447172 505 ntBASIC19.91■□□□□ 0.78
TSPAN3O60637 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.91■□□□□ 0.78
TSPAN3O60637 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.91■□□□□ 0.78
TSPAN3O60637 AC097493.4-201ENST00000641197 219 ntBASIC19.91■□□□□ 0.78
TSPAN3O60637 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TSPAN3O60637 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.91■□□□□ 0.78
TSPAN3O60637 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TSPAN3O60637 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TSPAN3O60637 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.91■□□□□ 0.78
TSPAN3O60637 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TSPAN3O60637 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.91■□□□□ 0.78
TSPAN3O60637 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TSPAN3O60637 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.91■□□□□ 0.78
TSPAN3O60637 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TSPAN3O60637 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TSPAN3O60637 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.91■□□□□ 0.78
TSPAN3O60637 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TSPAN3O60637 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TSPAN3O60637 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TSPAN3O60637 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TSPAN3O60637 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TSPAN3O60637 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.9■□□□□ 0.78
TSPAN3O60637 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TSPAN3O60637 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.9■□□□□ 0.78
TSPAN3O60637 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.9■□□□□ 0.78
TSPAN3O60637 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TSPAN3O60637 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.9■□□□□ 0.78
TSPAN3O60637 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.9■□□□□ 0.78
TSPAN3O60637 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.9■□□□□ 0.78
TSPAN3O60637 KRT18P21-201ENST00000515767 1272 ntBASIC19.9■□□□□ 0.78
TSPAN3O60637 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.9■□□□□ 0.78
TSPAN3O60637 NAPSB-206ENST00000562112 1266 ntBASIC19.9■□□□□ 0.78
TSPAN3O60637 AC012306.2-201ENST00000609350 630 ntBASIC19.9■□□□□ 0.78
TSPAN3O60637 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.9■□□□□ 0.78
TSPAN3O60637 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TSPAN3O60637 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TSPAN3O60637 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TSPAN3O60637 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.9■□□□□ 0.78
TSPAN3O60637 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TSPAN3O60637 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.89■□□□□ 0.77
TSPAN3O60637 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.89■□□□□ 0.77
TSPAN3O60637 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
TSPAN3O60637 MIR1224-201ENST00000408193 85 ntBASIC19.89■□□□□ 0.77
TSPAN3O60637 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TSPAN3O60637 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.89■□□□□ 0.77
TSPAN3O60637 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.89■□□□□ 0.77
TSPAN3O60637 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.89■□□□□ 0.77
TSPAN3O60637 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TSPAN3O60637 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TSPAN3O60637 AP000692.2-201ENST00000608391 879 ntBASIC19.89■□□□□ 0.77
TSPAN3O60637 DGCR10-201ENST00000609839 495 ntBASIC19.89■□□□□ 0.77
TSPAN3O60637 AC010947.1-201ENST00000623454 693 ntBASIC19.89■□□□□ 0.77
TSPAN3O60637 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.89■□□□□ 0.77
TSPAN3O60637 LINC01568-207ENST00000641790 1380 ntBASIC19.89■□□□□ 0.77
TSPAN3O60637 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.89■□□□□ 0.77
TSPAN3O60637 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TSPAN3O60637 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TSPAN3O60637 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
TSPAN3O60637 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TSPAN3O60637 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.88■□□□□ 0.77
TSPAN3O60637 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.88■□□□□ 0.77
TSPAN3O60637 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
TSPAN3O60637 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TSPAN3O60637 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TSPAN3O60637 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms