Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 AP001271.2-201ENST00000624018 1556 ntBASIC17.05■□□□□ 0.32
GMDSO60547 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GMDSO60547 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.05■□□□□ 0.32
GMDSO60547 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
GMDSO60547 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GMDSO60547 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GMDSO60547 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GMDSO60547 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
GMDSO60547 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GMDSO60547 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
GMDSO60547 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GMDSO60547 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GMDSO60547 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
GMDSO60547 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
GMDSO60547 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.04■□□□□ 0.32
GMDSO60547 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GMDSO60547 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GMDSO60547 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GMDSO60547 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GMDSO60547 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
GMDSO60547 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GMDSO60547 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
GMDSO60547 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GMDSO60547 AL355802.2-201ENST00000402069 882 ntBASIC17.04■□□□□ 0.32
GMDSO60547 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.04■□□□□ 0.32
GMDSO60547 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GMDSO60547 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.04■□□□□ 0.32
GMDSO60547 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GMDSO60547 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.04■□□□□ 0.32
GMDSO60547 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.04■□□□□ 0.32
GMDSO60547 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GMDSO60547 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GMDSO60547 HLA-B-256ENST00000639848 1089 ntBASIC17.04■□□□□ 0.32
GMDSO60547 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GMDSO60547 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GMDSO60547 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
GMDSO60547 AC020916.1-201ENST00000587762 1774 ntBASIC17.04■□□□□ 0.32
GMDSO60547 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.04■□□□□ 0.32
GMDSO60547 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GMDSO60547 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GMDSO60547 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GMDSO60547 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GMDSO60547 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GMDSO60547 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.03■□□□□ 0.32
GMDSO60547 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GMDSO60547 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.03■□□□□ 0.32
GMDSO60547 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GMDSO60547 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GMDSO60547 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.03■□□□□ 0.32
GMDSO60547 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GMDSO60547 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
GMDSO60547 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GMDSO60547 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GMDSO60547 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GMDSO60547 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GMDSO60547 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.03■□□□□ 0.32
GMDSO60547 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GMDSO60547 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.03■□□□□ 0.32
GMDSO60547 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.03■□□□□ 0.32
GMDSO60547 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GMDSO60547 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.03■□□□□ 0.32
GMDSO60547 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.03■□□□□ 0.32
GMDSO60547 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.03■□□□□ 0.32
GMDSO60547 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GMDSO60547 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GMDSO60547 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GMDSO60547 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GMDSO60547 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.03■□□□□ 0.32
GMDSO60547 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GMDSO60547 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.03■□□□□ 0.32
GMDSO60547 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GMDSO60547 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GMDSO60547 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.03■□□□□ 0.32
GMDSO60547 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GMDSO60547 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.03■□□□□ 0.32
GMDSO60547 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GMDSO60547 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GMDSO60547 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
GMDSO60547 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GMDSO60547 AL032819.2-201ENST00000624543 2162 ntBASIC17.02■□□□□ 0.32
GMDSO60547 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
GMDSO60547 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GMDSO60547 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
GMDSO60547 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
GMDSO60547 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
GMDSO60547 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GMDSO60547 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
GMDSO60547 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.02■□□□□ 0.32
GMDSO60547 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GMDSO60547 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.02■□□□□ 0.32
GMDSO60547 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GMDSO60547 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.02■□□□□ 0.32
GMDSO60547 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GMDSO60547 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GMDSO60547 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.02■□□□□ 0.32
GMDSO60547 AC005829.2-201ENST00000571422 1056 ntBASIC17.02■□□□□ 0.32
GMDSO60547 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
GMDSO60547 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
GMDSO60547 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
GMDSO60547 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms