Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.23■□□□□ 0.51
URB1O60287 AC092329.2-201ENST00000598402 547 ntBASIC18.23■□□□□ 0.51
URB1O60287 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.23■□□□□ 0.51
URB1O60287 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
URB1O60287 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
URB1O60287 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
URB1O60287 AC116351.2-201ENST00000606540 1585 ntBASIC18.23■□□□□ 0.51
URB1O60287 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
URB1O60287 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
URB1O60287 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.23■□□□□ 0.51
URB1O60287 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.23■□□□□ 0.51
URB1O60287 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.23■□□□□ 0.51
URB1O60287 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
URB1O60287 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.23■□□□□ 0.51
URB1O60287 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
URB1O60287 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
URB1O60287 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.23■□□□□ 0.51
URB1O60287 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.23■□□□□ 0.51
URB1O60287 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
URB1O60287 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
URB1O60287 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
URB1O60287 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
URB1O60287 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.22■□□□□ 0.51
URB1O60287 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
URB1O60287 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
URB1O60287 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
URB1O60287 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
URB1O60287 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.22■□□□□ 0.51
URB1O60287 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.22■□□□□ 0.51
URB1O60287 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.22■□□□□ 0.51
URB1O60287 AL160237.2-201ENST00000556165 472 ntBASIC18.22■□□□□ 0.51
URB1O60287 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.22■□□□□ 0.51
URB1O60287 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
URB1O60287 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.22■□□□□ 0.51
URB1O60287 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.22■□□□□ 0.51
URB1O60287 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
URB1O60287 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
URB1O60287 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
URB1O60287 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
URB1O60287 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
URB1O60287 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
URB1O60287 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
URB1O60287 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
URB1O60287 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.22■□□□□ 0.51
URB1O60287 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
URB1O60287 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
URB1O60287 PCDHAC2-203ENST00000615316 3011 ntBASIC18.21■□□□□ 0.51
URB1O60287 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
URB1O60287 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
URB1O60287 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
URB1O60287 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.21■□□□□ 0.51
URB1O60287 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
URB1O60287 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.21■□□□□ 0.51
URB1O60287 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
URB1O60287 AC104692.2-201ENST00000603054 253 ntBASIC18.21■□□□□ 0.51
URB1O60287 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
URB1O60287 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
URB1O60287 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
URB1O60287 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
URB1O60287 LINC00565-201ENST00000562710 2331 ntBASIC18.21■□□□□ 0.51
URB1O60287 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
URB1O60287 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.21■□□□□ 0.51
URB1O60287 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.21■□□□□ 0.51
URB1O60287 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
URB1O60287 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.21■□□□□ 0.51
URB1O60287 AP000523.1-201ENST00000398242 1049 ntBASIC18.21■□□□□ 0.51
URB1O60287 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
URB1O60287 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.21■□□□□ 0.51
URB1O60287 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
URB1O60287 NEK4P2-201ENST00000580004 1012 ntBASIC18.21■□□□□ 0.51
URB1O60287 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
URB1O60287 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
URB1O60287 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
URB1O60287 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
URB1O60287 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
URB1O60287 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
URB1O60287 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
URB1O60287 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
URB1O60287 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
URB1O60287 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
URB1O60287 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.2■□□□□ 0.5
URB1O60287 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
URB1O60287 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
URB1O60287 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
URB1O60287 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
URB1O60287 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
URB1O60287 AC026310.3-201ENST00000625186 2373 ntBASIC18.2■□□□□ 0.5
URB1O60287 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
URB1O60287 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.2■□□□□ 0.5
URB1O60287 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.2■□□□□ 0.5
URB1O60287 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.2■□□□□ 0.5
URB1O60287 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.2■□□□□ 0.5
URB1O60287 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
URB1O60287 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
URB1O60287 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
URB1O60287 AL732292.2-201ENST00000609649 430 ntBASIC18.2■□□□□ 0.5
URB1O60287 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
URB1O60287 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
URB1O60287 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
URB1O60287 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms