Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRAF3IP2O43734 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.34
TRAF3IP2O43734 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRAF3IP2O43734 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAF3IP2O43734 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP2O43734 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP2O43734 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAF3IP2O43734 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
TRAF3IP2O43734 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
TRAF3IP2O43734 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP2O43734 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAF3IP2O43734 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP2O43734 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP2O43734 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAF3IP2O43734 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP2O43734 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP2O43734 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP2O43734 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAF3IP2O43734 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP2O43734 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.2■□□□□ 0.34
TRAF3IP2O43734 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.2■□□□□ 0.34
TRAF3IP2O43734 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP2O43734 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRAF3IP2O43734 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP2O43734 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP2O43734 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAF3IP2O43734 TEX21P-204ENST00000641479 1693 ntBASIC17.2■□□□□ 0.34
TRAF3IP2O43734 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 GCSHP5-201ENST00000443090 522 ntBASIC17.19■□□□□ 0.34
TRAF3IP2O43734 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 HTR7P1-201ENST00000538670 1336 ntBASIC17.19■□□□□ 0.34
TRAF3IP2O43734 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF3IP2O43734 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.18■□□□□ 0.34
TRAF3IP2O43734 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 FAM197Y4-202ENST00000622692 608 ntBASIC17.18■□□□□ 0.34
TRAF3IP2O43734 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms