Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.55■□□□□ 0.72
SMAD6O43541 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SMAD6O43541 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMAD6O43541 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SMAD6O43541 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMAD6O43541 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMAD6O43541 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SMAD6O43541 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.54■□□□□ 0.72
SMAD6O43541 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SMAD6O43541 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMAD6O43541 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMAD6O43541 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.54■□□□□ 0.72
SMAD6O43541 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMAD6O43541 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.54■□□□□ 0.72
SMAD6O43541 AP005242.2-201ENST00000580065 1175 ntBASIC19.54■□□□□ 0.72
SMAD6O43541 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
SMAD6O43541 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.54■□□□□ 0.72
SMAD6O43541 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.54■□□□□ 0.72
SMAD6O43541 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMAD6O43541 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.54■□□□□ 0.72
SMAD6O43541 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMAD6O43541 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.54■□□□□ 0.72
SMAD6O43541 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.54■□□□□ 0.72
SMAD6O43541 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMAD6O43541 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMAD6O43541 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.54■□□□□ 0.72
SMAD6O43541 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMAD6O43541 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.54■□□□□ 0.72
SMAD6O43541 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMAD6O43541 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.53■□□□□ 0.72
SMAD6O43541 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.53■□□□□ 0.72
SMAD6O43541 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMAD6O43541 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMAD6O43541 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.53■□□□□ 0.72
SMAD6O43541 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
SMAD6O43541 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMAD6O43541 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SMAD6O43541 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SMAD6O43541 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SMAD6O43541 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.53■□□□□ 0.72
SMAD6O43541 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.53■□□□□ 0.72
SMAD6O43541 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.53■□□□□ 0.72
SMAD6O43541 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.53■□□□□ 0.72
SMAD6O43541 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
SMAD6O43541 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.53■□□□□ 0.72
SMAD6O43541 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SMAD6O43541 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
SMAD6O43541 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMAD6O43541 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.52■□□□□ 0.72
SMAD6O43541 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMAD6O43541 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.52■□□□□ 0.72
SMAD6O43541 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.52■□□□□ 0.72
SMAD6O43541 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMAD6O43541 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SMAD6O43541 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMAD6O43541 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMAD6O43541 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.52■□□□□ 0.72
SMAD6O43541 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.52■□□□□ 0.72
SMAD6O43541 MFAP1P1-201ENST00000442257 1255 ntBASIC19.52■□□□□ 0.72
SMAD6O43541 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.52■□□□□ 0.72
SMAD6O43541 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.52■□□□□ 0.72
SMAD6O43541 AC096733.2-201ENST00000609937 1394 ntBASIC19.52■□□□□ 0.72
SMAD6O43541 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SMAD6O43541 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SMAD6O43541 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SMAD6O43541 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
SMAD6O43541 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.51■□□□□ 0.71
SMAD6O43541 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMAD6O43541 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMAD6O43541 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SMAD6O43541 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMAD6O43541 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.51■□□□□ 0.71
SMAD6O43541 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.51■□□□□ 0.71
SMAD6O43541 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
SMAD6O43541 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMAD6O43541 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.51■□□□□ 0.71
SMAD6O43541 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.51■□□□□ 0.71
SMAD6O43541 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.51■□□□□ 0.71
SMAD6O43541 NAPSB-206ENST00000562112 1266 ntBASIC19.51■□□□□ 0.71
SMAD6O43541 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.51■□□□□ 0.71
SMAD6O43541 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMAD6O43541 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMAD6O43541 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMAD6O43541 Z82202.1-201ENST00000623446 1880 ntBASIC19.51■□□□□ 0.71
SMAD6O43541 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMAD6O43541 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMAD6O43541 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMAD6O43541 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMAD6O43541 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.51■□□□□ 0.71
SMAD6O43541 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMAD6O43541 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMAD6O43541 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.51■□□□□ 0.71
SMAD6O43541 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.51■□□□□ 0.71
SMAD6O43541 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SMAD6O43541 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMAD6O43541 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMAD6O43541 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMAD6O43541 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.5■□□□□ 0.71
SMAD6O43541 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMAD6O43541 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms